Lates calcarifer (barramundi perch): 108895879
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Entry
108895879 CDS
T04895
Name
(RefSeq) arg8-vasotocin receptor
KO
K04226
arginine vasopressin receptor 1A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04081
Hormone signaling
lcf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108895879
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108895879
04081 Hormone signaling
108895879
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108895879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108895879
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Vasopressin
108895879
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
V1R_C
7tm_4
PspB
Motif
Other DBs
NCBI-GeneID:
108895879
NCBI-ProteinID:
XP_018550346
UniProt:
A0A4W6C110
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Position
LG18:12729448..12735156
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AA seq
418 aa
AA seq
DB search
MLFTSESSCNFTGRNCTEGINVTQRLETGAGAVAAGNISGEKNATDPFGRNEEVAKIEIT
VLSLAFLAAVVGNLSVLLAMYRTRRKPSRMHLFMKHLSLADLVVAFFQVLPQLCWEITFR
FYGPDFLCRIVKHLQVLGMFASTYMMVMMTLDRYIAICHPLQTIQQPTQRAYIMIGSTWA
CSLVLSTPQYFIFSLSEVHPGSAVYDCWGHFMEPWGLRAYITWFTAGIFLVPVVVLVLCY
GFICRTIWMNLKYKTRRKSAGAVAEATKNGILGRNSVSSVSTISRAKLRTVKMTFVIVVA
YVVCWAPFFIVQMWSVWDETFSWDDSENTAVTLSALLASLNSCCNPWIYMIFSGHLLSDF
AGSLPCCRRLRNKFSHQDSDSSIRRTTLLSRLQGPRLSEPFRDLNPVPKNCSQIPSAS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcacctcggagagctcctgcaacttcacgggcagaaattgcaccgaaggaatc
aacgtaacgcagcgactggagaccggcgccggagcagtggctgccgggaacatcagcggg
gagaaaaacgccaccgacccgttcggacggaacgaagaggtggccaagatcgagatcacc
gtcctgagcctcgcgtttctcgcggccgttgtggggaacctgagcgtgctgctggccatg
tacaggacccggcggaaaccgtcgcgcatgcacctgttcatgaagcacctgagcctggcg
gacctggtggtggccttcttccaggtgctgccgcagctctgctgggagatcaccttccgc
ttctacgggccggactttctgtgccgcatcgtgaagcacctgcaggtgctgggcatgttc
gcctccacctacatgatggtgatgatgaccctggaccgctacatcgccatctgccacccg
ctgcagacgatccagcagccaacgcagcgcgcgtacatcatgatcggctccacctgggcg
tgcagcctggtcctcagcaccccgcagtacttcatcttctccctgagcgaggtgcacccg
ggctcggccgtctacgactgctggggacactttatggaaccgtgggggctgcgcgcgtac
atcacctggttcactgcagggatcttcctcgtgcctgtggtcgtgctcgtgctctgctac
ggattcatctgccgcacaatctggatgaacctcaaatacaagacccggaggaagagcgcg
ggcgcggtggcagaggccaccaagaacgggatcctgggcaggaactcggtcagcagcgtc
agcaccatctctcgcgccaaattacgcacggtgaagatgactttcgtgatcgtggtggca
tacgtggtgtgctgggcgcctttcttcatcgtgcagatgtggtcagtgtgggacgagacc
ttctcctgggacgactctgagaacaccgccgtgactctctccgccctgctcgccagcctc
aacagctgctgcaacccctggatttacatgatcttcagcggtcacctcctctcagacttc
gccggcagcctgccgtgctgccgccggctgaggaacaagttcagccaccaggactcggac
agcagcatccgccggaccacgctgctgtcccgcctgcagggtccacgcctctcagagccg
ttcagagacctcaatcccgtccctaaaaactgctcgcagatcccgtctgcgtcctga
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