Lates calcarifer (barramundi perch): 108895900
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Entry
108895900 CDS
T04895
Name
(RefSeq) peroxisomal succinyl-coenzyme A thioesterase isoform X1
KO
K01068
acyl-coenzyme A thioesterase 1/2/4 [EC:
3.1.2.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00062
Fatty acid elongation
lcf01040
Biosynthesis of unsaturated fatty acids
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108895900
01040 Biosynthesis of unsaturated fatty acids
108895900
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108895900
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.2 palmitoyl-CoA hydrolase
108895900
Lipid biosynthesis proteins [BR:
lcf01004
]
Fatty acid synthase
Component type
108895900
BRITE hierarchy
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GFIT
Motif
Pfam:
BAAT_C
Bile_Hydr_Trans
DLH
Peptidase_S9
FSH1
UPA
Motif
Other DBs
NCBI-GeneID:
108895900
NCBI-ProteinID:
XP_018550391
UniProt:
A0A4W6BTQ0
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Position
LG18:12743428..12751069
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AA seq
465 aa
AA seq
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MSLERCLSFSRATLRSVCFTKQHLQRCVHICVRRSSTMSQAALPILSVFPSRALVDEKFK
VLVENLPPGCPVTIHSLHHSEDQDYWEAYGHYISDDRGKVSVSDDLSFGGTYTGKEPMGL
LWSMRPVLGSRKGLRLRKMNVCTPMLMDISVYSRHDGFRDQAPLASVLIERWYMAPGVRR
IDIRERGVRGTLFIPPGPGPFPGLLDMWGGGGGLLEYRSALLASHGYVSLALEYFSPGQL
QTADLEFNYFETAFNIVKDHPQVMPHRVGIFGLSLGSIVTMALAVESRIVRPRCCVCISG
NHCFPPGRTLAGITGEVDMNYDKVRVDENNYHIWRDVGLAIMKEPSSKLDMGKINCPILL
VNGHDDQNWPTVESAEDIAEMMRAAGKEHLLTRLEYPDTGHLIEPPFSPHFRATNFIVNL
TKEKVIMLWGGQTKPHSDAQEDSWRRILTFLQQHLYCSPSPKARL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggagaggtgtttaagctttagcagagctactctgaggtctgtgtgttttacc
aagcaacacctgcaaagatgtgttcatatctgtgtcagacgatcatcaaccatgtcccag
gccgcccttccgattctctccgtcttcccctctcgagctctggtggacgagaagttcaag
gtgctcgtggagaatctacctccaggatgtccagtaacaatccactccctccaccactcc
gaggaccaggactactgggaggcctacgggcactacattagcgatgacagaggaaaagta
tctgtttcagatgatttgagttttgggggcacatacacaggaaaagagcccatgggtttg
ttgtggagcatgcgtcctgtcctaggcagtcgcaaaggcctcaggttaagaaagatgaac
gtctgcacgccgatgctgatggacatctcggtctacagcagacacgacggcttcagggac
caggctcctctggcctcggtgctcatagagagatggtacatggctccaggggtccggagg
atcgatatcagagagagaggagtacgggggaccctgtttatacctccaggtccaggaccc
ttccctgggctgttggacatgtgggggggcggtggagggctgctggagtaccgttcggcc
ttgctggcgtcccacggttatgtttctctggcgttggaatatttctcccccggtcagctg
caaacagcagacctagagttcaactattttgagacagcatttaatatcgtcaaggaccat
cctcaagtgatgccacacagagttggaatatttggcctctcccttggctcgattgtgacc
atggcgttggcagttgagagtaggattgtcagacctcgttgttgtgtttgtatcagtggc
aaccactgtttcccacctgggaggaccctcgctggaatcaccggggaagttgacatgaat
tatgacaaagtgcgtgtggatgagaacaactatcatatatggcgagatgtgggtctagca
attatgaaggagccttcgagtaaactggacatggggaaaatcaactgtccaattttgctg
gtcaacggtcatgatgatcagaattggcctacggtggagtcggctgaggatatcgctgag
atgatgcgtgcggcaggtaaggagcacctactgaccagactggagtatcctgatactgga
cacctgattgagccgcccttctcaccgcacttcagagcgactaattttatagtaaacctc
acaaaagaaaaagtgataatgctgtggggagggcaaaccaaaccccattctgacgctcag
gaggattcctggaggaggattttaacttttctgcagcagcatctgtactgcagtccaagt
cccaaagcaaggctgtga
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