Lates calcarifer (barramundi perch): 108895910
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Entry
108895910 CDS
T04895
Name
(RefSeq) transcription factor GATA-3 isoform X1
KO
K17895
GATA-binding protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895910
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108895910
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Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
108895910
NCBI-ProteinID:
XP_018550399
UniProt:
A0A4W6D4X6
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Position
LG18:11547587..11564124
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AA seq
443 aa
AA seq
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MEVSADQPRWMSHHPAVLNDQHPGSHHPGLGHSYMDPSQYPLADDVDVLFNIDGQGNHVS
PYYGNSVRAVQRYPPPPHSSQVCRPSLLHGSLPWLEGSKGIAPHHSTSPWNLSPFPKNPL
HHGSPASLSVYPPASSSSLSTGHSSPHLFTFPPTPPKDVSPDPGISTPGSSSSGRQEDKE
CIKYQVTLAESMKLESAHSRSVASIGAGSSSAHHPIATYPPYVPEYGPGLFPPSSLIGGS
SSSYGSKTRPKTRSCSEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIK
PKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYFKLHNINRPLTMKKEGIQ
TRNRKMSSKSKKSKKSQDNMEDFSKSLMDKSSSFSPAALSRHMSSFPPFSHSSHMLTTPT
PMHPSSSLPFAPHHPSSMVTAMG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaagtgcggatcagccacgatggatgagccatcatcccgcggtattgaacgac
cagcatcccggctcacatcacccgggcctcggccactcatacatggacccttcgcagtat
cccctcgctgacgatgtggatgtactctttaatatcgatggacaggggaaccacgtctct
ccatattatggaaactctgtccgagccgtccagaggtaccctcctcctccacacagtagc
caggtgtgccgtccctcattactgcacggctctctgccctggctggaggggagcaaaggc
atcgccccgcaccacagcacttctccttggaacctgagccccttccccaagaaccccctg
caccacggctccccggccagcctgtccgtctaccccccggcctcctcctcctccctgtcc
accggtcactccagtccgcacctcttcacatttcccccgacccctccgaaagacgtatcc
ccggacccgggcatatccaccccgggctccagcagctccgggcggcaggaggataaagag
tgcataaagtaccaggtgaccctggccgagagtatgaaactggagtcagctcacagccgg
agcgtggcatcaatcggagcagggtcatcctctgcccaccaccccatcgccacataccca
ccctatgtccctgaatacggcccaggcctcttcccaccaagtagcctgataggtgggtca
tcttctagttatggttccaaaacaagaccaaaaacaaggtcctgttcagaaggtagagag
tgtgtgaactgcggggccacgtcgactccgctgtggaggcgggacggtacgggtcactat
ctgtgtaacgcctgcggactctatcacaagatgaacgggcagaatcgccctctcatcaaa
cccaagcggcggctgtccgcagccaggcgggcagggacgtcatgtgcaaactgtcagacg
acaacgacgacgctgtggcggagaaacgccaacggggacccggtgtgtaacgcctgcggc
ctctactttaaactgcacaatatcaaccgacctctgaccatgaagaaggaaggcatccag
accaggaacaggaagatgtccagcaagtccaagaagagcaaaaagtcccaagacaacatg
gaagacttctccaagagcctgatggacaagagcagctccttcagcccagccgccttgtcc
cgccacatgtcatccttcccccccttctcgcactccagccacatgctgaccaccccgaca
cccatgcacccttcctcaagcctcccgtttgccccccaccacccttccagtatggtcaca
gccatgggttag
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