KEGG   Lates calcarifer (barramundi perch): 108895943
Entry
108895943         CDS       T04895                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108895943
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108895943
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 WD_LRWD1 MIOS_WD40 TAF1C_beta-prop
Other DBs
NCBI-GeneID: 108895943
NCBI-ProteinID: XP_018550475
UniProt: A0A4W6F0J9
LinkDB
Position
LG7_1:complement(8182383..8188849)
AA seq 658 aa
MLFRSIVDRGVGRRRQNALPADPRPRYPLSSLLQGYQCVRHDEHISYGNLGDSVPPFGLA
FSSAGNLQNVLAAANEEGIVRIYNTENRENPLLKEWLAHENAVFDIAWVPGEPQVVTAAG
DQMARLWDVKSGDMLGSFKGHLCSLKSVAFSPEEKAVFCTGARDGNIMVWDTRCSKKDGF
YKQVKQISGAHNKAETNPPSKTKRRRSCPRGMAPSVDTQQSVTVVLFRDQHTLISSGAVD
GVIKMWDLRKNYTVHRQDPVPLQTYPYPGSCMRMRLGYSGLVLDSTRSNVMCNCTDDNIY
TFNVSGVKTTPVAVFSGHQNSSFYVKSTISPDDQFLASGSSDNHTYIWKISDPQHPPMML
QGHSEEVTSVAWCPTDFTKIASCSDDHTVRIWRLHREMDGVQSTVGEANLVGWARPKSPT
RPSIRTETTPAKTQRTESLGGLSSPQLAVCAPSGAALPLPSSTTSPVQSQEAKAATVRQR
TPSSIKQWLSPSHGSPSQVSPPLRRVLSPCPQSPTSSASPIERRAKRRLETGNSVLSTGC
EGAGQCDCVTELYPTAKRSRALSGICCPAQESRVQTDCHTDDKQASPRQSGKENYSPRRM
DWLSVMGQKMRKGQGSPRSPRSPSASKKQEGKTPASPTIRSPQTMKKISTYFTRQPPE
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgttgttccgctctattgttgacagaggagtgggcagacggaggcagaatgccctccct
gcagatcctcggcccaggtatcctctgagctccctactgcaaggctaccagtgtgttcga
catgatgagcacatctcctatggtaacctgggtgactctgtgccaccgtttggactagct
ttctcctcagccgggaacctacagaacgttcttgcagctgctaatgaagaaggcattgtt
aggatctacaacacagaaaacagagaaaacccgctccttaaagaatggctggctcatgag
aatgctgtctttgacattgcttgggtaccgggggagcctcaggtggtgacggctgcaggt
gatcagatggccaggttgtgggatgtaaagtcaggagacatgttaggcagcttcaaaggc
cacctctgcagcctcaagtccgttgcattctcacctgaggagaaagctgtgttctgtact
ggagccagagatggaaatattatggtctgggacaccaggtgcagcaaaaaagatggtttc
tacaaacaagtgaaacagatcagtggcgctcacaacaaagcagagacaaaccccccctct
aaaacaaagaggagacggagctgcccgcgtggcatggctcccagtgtggatacccagcag
agtgtcacagtggttctgtttagggatcagcataccctcatctcttctggggctgttgat
ggagtaatcaagatgtgggatctgaggaagaactacaccgtgcaccgtcaggatcctgtt
ccgctgcagacgtacccatacccgggctcttgcatgcgcatgcggctgggttattcaggg
cttgttctggactccacaagatccaatgtcatgtgtaactgcacagatgataatatctac
acgttcaacgtcagtggagtaaaaacaactccagtggcagttttcagcggccaccagaac
tcctcattctatgttaagtccactattagtccagatgaccagttcttggccagtggctca
agtgacaatcacacatacatctggaagatctcagatcctcaacatcctcccatgatgctt
caaggccacagtgaggaagtgacatctgttgcatggtgcccaacagatttcactaagatt
gcttcctgttcggatgaccacactgtacggatctggaggcttcaccgggaaatggatgga
gtccagtctacagtgggagaagccaaccttgtaggctgggcacgtcctaaatctcccaca
aggccttcaatcagaactgagacgacacctgcaaaaacccagaggacagagagtctcgga
ggcctgtcctcaccgcagcttgcggtctgcgctcccagtggagccgccctgcctctgccc
tccagcaccacctcacctgtccagtctcaggaagcgaaggctgccactgtccgccagaga
acgccatcctccatcaaacagtggttatctccaagccacgggtctcccagtcaggtcagc
cctcctctccgcagggtgctgagcccgtgtccccagagcccgacgagcagcgcctctccc
atcgaacggcgggccaaacgcaggctggagaccggcaacagcgtgctgtccacaggctgc
gagggcgccggacaatgcgactgcgttactgaactttaccccacggccaagagaagccgg
gccctgtccggcatctgctgccctgctcaggagagccgggtacaaacagactgtcacaca
gacgacaagcaagcctcacctagacagagtggaaaggagaattactctcccagaagaatg
gactggctctctgtgatgggccaaaagatgaggaaaggtcaaggaagcccgcgttctccc
agaagtcccagtgcctctaagaaacaagagggcaagacaccagcttcaccaacaatccgc
tcgccgcaaaccatgaagaaaatctcaacatatttcacaagacagcctccggagtga

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