Lates calcarifer (barramundi perch): 108896094
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Entry
108896094 CDS
T04895
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896094
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108896094
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_16
TPR_6
TPR_8
TPR_17
ANAPC3
TPR_14
TPR_11
Coatomer_E
TPR_9
TPR_MalT
TPR_10
RPN7
Motif
Other DBs
NCBI-GeneID:
108896094
NCBI-ProteinID:
XP_018550607
UniProt:
A0A4W6C8B6
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All DBs
Position
LG19:complement(3423296..3452885)
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AA seq
827 aa
AA seq
DB search
MDTGEAPAQRPVTLDITVEDVNKDAPGPPQPDSSETPSRDSVLPQEDSIDLGGEFATPQE
DSSATPSESLMDKLNDQMMESVMISDSPNNSEENDVAPIDSFLDGGEEESGGETSGDKEE
QLETGQNTTEIKVSVEEQDMDGSEEKVEEDTKKQADTQEEDTARVSPQGDTQSPSDLKNE
EPAAQSASGTSPKEEPVPVCTIFSHGTQPKSLVPDGFQPTLIKSPSFSMGSGGGSDEAVT
PSKLTAPLVCQPSPSLSKFFTDNGQTNPASDFFDSFTTPSSFISVSNPNAEIPSGASPAP
IAPTPDRQLSSTSSSISTAGGSLDSGTPTPSTVFCPAPTDSTAKPQPPLPQMVPAPAQAP
ASAPTTHPQPFNQLQAVFSGNDDPFATALSLSEVDRRHDAWLPSEETRKMLISVATQQYS
PAYIESNRLTMPGLKFDNLQGDAVKDLMLRFLGEQAAMKRQVLTANSVEQSFTGLKQLVT
SKNWRAAVDLTGRLLTAHGQGYGKTGQPTSHTTDSLQLWFVRLALLTKLNLFQNAELELE
PFGNLDHPDLYYEYYPTVYPGRRGSMVPFSMRLLHAELPQYLAKPQEALDRLHNLKTVCL
VILENLEKGLAEDGSMITLTQENRQASLKLWQSRLSRVMYSMANCLLLMKDYVLAVETYH
SIIQYEPQQRVQLLSGIGRIFLQIGDVKTAERYFQDVEKACQMKGSQSSHTTCMLMNRAF
VYLSQNNYAEAHASFTEVLKIDPKNPVANNNAAVCLLYLGRLKESLGQLEGLVQQDPALY
LHESVLFNLTTMYELESSRSTQKKQALLEAVACREGDSFNTQCLKLV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggatactggggaggctcctgctcagcggccagtcaccctggacatcacagtggaggat
gtaaacaaggacgctccaggccccccgcagccagactcaagcgagaccccttccagagac
agcgtcctgccccaggaagacagtatcgacctaggtggggagtttgccaccccccaggag
gacagcagtgccacaccttctgaaagcctgatggacaagctcaatgaccagatgatggag
agtgtcatgatttctgactcacccaataacagtgaggagaatgatgtggctcctattgac
tcttttctggatggaggggaggaggagagtggaggagagacctcaggagacaaagaggaa
caacttgaaactggacagaatacaactgagattaaagtttctgtggaggaacaggacatg
gatggttctgaagagaaagtagaagaggacacaaagaagcaggcagacacacaagaggaa
gacacggcccgtgtttcacctcaaggtgacacacagagcccatctgatcttaaaaatgag
gaaccagcagcacagtcagccagtggtactagcccaaaagaagaacctgtaccagtgtgc
accatattcagccatggcactcagccgaagtctctggtgcctgatggcttccagcccacc
cttatcaagtctcccagttttagcatggggagtggtgggggaagcgatgaggcggtgacc
cccagcaagctgacagccccccttgtgtgccagcccagccccagcctcagtaagtttttc
actgacaatgggcagaccaatccagcttctgacttttttgattcctttaccaccccgtcc
tccttcatttccgtttccaatcccaacgcagagatcccttcaggtgccagccctgcaccc
atagcccctacccctgatcgccagctctcttccacttcttcctctatttccactgctgga
ggatccttggactctggtactcccacccctagcacagtgttttgccctgctcctaccgat
tcaaccgccaagccccaacctcctcttccccaaatggtcccagctccagcgcaagccccc
gcctcagccccaactactcacccacagcccttcaaccaactgcaagctgtattctcgggc
aatgacgacccatttgcgacagcactgagcctgagcgaggtggacaggcgccacgatgcc
tggttgccatctgaggagaccaggaagatgttgatctctgtggccacccagcagtacagc
ccagcttacatagagtccaacagactcacaatgcctggactcaagtttgacaacctacag
ggtgatgctgtgaaagacctaatgcttcgtttcctgggagaacaggcagcaatgaagcga
caagttctcactgcgaactctgtggagcagtccttcacaggcctcaaacagcttgtgacc
agtaagaactggcgggcagctgtagacctgacgggccggctgctgacagctcatggtcag
ggatacggaaagactggccagccaacatcccacaccactgactcactgcagctttggttt
gtgcggctggcccttctcaccaagctgaaccttttccaaaatgctgagctggagcttgaa
ccctttggcaacctggatcatccagacctctactatgagtactaccccacagtttaccct
gggaggagaggctccatggtgccattctccatgcggctgctgcatgccgagcttccccag
tacctggccaagccccaggaggctctggaccgcctgcacaatctgaaaaccgtctgcctt
gttattctggagaacttggagaaaggcttggctgaggatggcagcatgatcactctaacc
caggagaacaggcaagcatctcttaaactgtggcagtctcgcctcagccgggtcatgtac
tccatggccaactgtctgctgctgatgaaggactacgttctggctgtggagacctatcac
tccattattcagtatgaacctcagcagagagtgcagctgctcagtggtataggacgcatc
ttcttgcagatcggagacgttaaaacagcagagaggtacttccaggatgtggagaaagcc
tgccagatgaaagggagccagtccagtcacaccacatgcatgctgatgaacagggccttt
gtctacctcagtcagaacaactacgctgaagcacatgcatccttcactgaagtcttaaaa
attgacccaaaaaaccctgttgccaacaacaatgcagcagtgtgcctgctgtacttgggc
cgtttgaaggagtccctaggccagctggagggtctggtgcaacaggaccctgcgctttac
ctccacgagagtgtcctcttcaacttgaccacgatgtacgagctggagtcatctcgtagc
acccaaaagaagcaggctctgttggaggctgtggcctgtcgagagggggacagcttcaac
acacagtgcctcaaactggtctaa
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