Lates calcarifer (barramundi perch): 108896106
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Entry
108896106 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896106
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108896106
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
LBP_BPI_CETP
RA
Motif
Other DBs
NCBI-GeneID:
108896106
NCBI-ProteinID:
XP_018550626
UniProt:
A0AAJ7Q9W6
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All DBs
Position
LG19:complement(3360548..3379577)
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AA seq
1093 aa
AA seq
DB search
MMEDSDVSQDTGHTSPLTGALDTPPDTIPSSSPLSPPSMPSHLPARPCRPKPLPPAVKSS
QLPSRPPLPPSTPPSLPPPVPLVSKPPTLSNHPPPSLPPPLSPVPVSPPVLSPQSAACSD
LAPSFPPCSLPPPLSPTVSSSPSSPPPQPPPVIPPVSPAPPLLSPIDRLIGSSSVWQPKG
LSQDQTSSILEKETAGTFLVRNTEDKGITLSVRMPDEQGEQLIHSLMVKQHKTFVHLDGS
SLVFDDIFKLISFYCASRDILTIPLRLPLAITTATKREELEVISAMGADFWTSDLNQKAK
NQNLVLDKNHNSLYLYVNPVTVEESPNKDLNHSSISKLDMITNQNTTSSLQNGEGPQKVS
PEDKGQTKTTPNQGIKYKRPPPRPPSLGTGSGMGLLFSSPPLLHSSSSVTPAAVRKEEGK
GGGEKEERKSMSTSPSPSRPPIPLQGRAAPPLPPAPLRRTSSKNSTDREVGQGMEREKGQ
NPAKKTEKKGGGDRGEEKTGSRSGLLGEEAEQENSSQHQQDVKRDREKREIEDEKEGKEV
KMDKEEDKHKISPQCSSSVKKPSRPVPPPRRKPCSPDASVCPNQAAGGLVNQSAGMRVPP
PSSARRPDVSLYSPQGGAVLATDPDSCSTSSTEEEGELSQEQEQNNHRPAESRSPKAAVR
RTSTTVMLDRARYRLSTVLTGLISHDRRLTQRIVELARDPLSYFGNLVKEHRAFTLETMS
NHSSSTELLQEIRQMMTQLKSYLLQSTELQAMLEPQHQYVQDKLENIVEAALCKSVLKPL
REPIYQSLEKLHISDSSMKQLTQNQSVVLGSTTTALGVTTAVPEASAMEKISIKLNNLHL
EYSPQKKIELLLKACKIIYDSMSISCPGRAHGADDFLPVMMYVLARSNLSALQLDVEYMM
ELMDPSLTIGEGSYYLTTTYGALEHIKTFDQQRSATRQLSREVQDSIHRWERRRTLNQER
MAQGSVRDFLTVCCPEVGTNAKTLGVLPTTTIEQLAEQCAARFEQDSYTLSVYMDGVHRP
LASTELALSVKNSYQPGAYCFVYHPVDQPNNQPGRSCPSDPPPAPPTESFFPADKEDVDT
VEPETEEESLISL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacagcgatgtttcccaggacactggccacacaagccctctgacaggagcg
ctcgatactccccctgataccatcccctcgtcttctcccctctctccaccttccatgccg
tcacaccttccagcccgaccatgtcgacccaaaccgttgcctcccgcagtgaagtccagc
cagctcccctctcgacctcccttacctccgtccactcctccgtccctccctccccctgtc
cctcttgtctccaaacctcccactctctccaaccaccctcccccatctcttccacctcct
ctctccccagtcccagtctctcctcccgtgctttctccccagtcagctgcctgctctgat
cttgctccctcttttcctccttgttctcttcctcctccattatctcccacagtctcatcc
tccccttcctcacccccgcctcaacctccccctgtcatcccaccagtctctccagctcct
ccgctgctgagccctatagatcgtctgattgggagttcctcagtatggcagcccaaagga
ctgagccaagaccaaacctctagtatcctggagaaagagacggctgggactttcctggtt
cgtaatacagaggacaagggcatcacgctgtcagtccgcatgcctgatgaacagggggag
cagctcatacacagtctgatggtcaaacaacacaagacatttgtccatttagatggctcc
tctctggtttttgatgacatcttcaaactgatctccttctactgtgccagcagggacatc
ctgaccatcccactgaggttacccctggcgattaccacggcaactaagagagaggagctg
gaggtcatctctgctatgggtgcagatttctggacatctgatctgaaccagaaggcaaag
aaccagaacctggttttggataaaaaccacaacagtctgtatttgtatgtcaatccagtt
accgtggaagagagccccaacaaagacctgaaccattcttctatctccaaactcgatatg
atcaccaatcaaaacaccacctcctccctgcagaatggagaaggcccacagaaggttagc
ccagaggacaaaggtcagactaagaccacacccaaccaggggattaaatataagcgtccc
ccaccccgaccccccagcctgggcacaggatctgggatgggcctcctcttctcctctccc
cccttgcttcacagttcatcttctgtaactccagcagctgtgagaaaagaggaaggaaag
ggaggaggggagaaagaagagaggaagtcaatgtcaacatcaccttctccatcgaggcct
cccattcccctgcagggccgagctgctccacctctgcctcctgctcctctccgtcgcacc
tcttccaaaaacagcaccgaccgagaggtaggacaggggatggagagagagaagggacaa
aatcctgccaagaaaactgagaaaaaggggggaggagacagaggagaggagaaaacagga
agtagatcaggtctgctgggtgaggaggctgaacaagagaacagtagtcaacatcaacaa
gatgttaaaagggacagagaaaagagagagatagaggatgagaaggagggaaaagaggtg
aaaatggataaagaagaggacaagcacaaaatcagtccccagtgttcgtcatcagtcaag
aaaccatcccgaccagtccctccaccaagaaggaaaccatgctccccggacgcatctgtg
tgccccaaccaggctgcaggaggattagtaaatcagagtgctgggatgagagtccctcct
ccctcgtcagcacggcggccagatgtgtcactgtactcgccacaagggggcgcggtgcta
gcgactgaccctgactcctgctctaccagcagcacagaagaggaaggagagctgagccag
gaacaggagcaaaacaaccatcgccctgcagagagccgtagtcccaaggcagcagtgagg
agaacatccaccaccgttatgttagaccgagcccgctaccgtctgtccaccgtcctcacc
ggcctcatcagccacgaccgccgtctcactcagcgcatagtggagctggccagggacccc
ctgagctacttcggtaacctggtaaaagagcaccgtgctttcaccttggagaccatgtca
aaccactcctcctccactgagctgttacaggagatcagacagatgatgactcaactgaag
agttacctactgcagagtacagagctgcaagccatgctggagcctcaacatcagtatgta
caagacaaactagagaacattgtggaagctgctctgtgtaagagcgtactgaagccacta
agggagccaatctaccagagtctggaaaaactgcacatcagcgacagcagcatgaaacag
ctgacacagaatcagtctgttgtcttaggaagcaccaccactgcattaggagtaaccact
gctgtccctgaggcctcggctatggagaagatcagcatcaaactgaacaaccttcatctg
gagtattctcctcagaaaaagattgagctgctgctcaaggcctgcaagatcatctacgac
tccatgtctatcagctgtccagggcgggcccatggcgctgatgacttccttcctgtaatg
atgtacgtcctggctagatccaatctgtctgccctgcagctcgatgttgaatatatgatg
gagttgatggacccatcactaacaataggagaaggttcctattatctgaccaccacctat
ggggctctggagcacataaagacttttgaccagcagaggtcagcaacacggcagctcagc
agagaggttcaggactctatccaccgctgggagagacgacgcacactcaaccaagaacgc
atggcccaaggatctgttcgggactttctaacagtgtgctgtcctgaggttggaaccaac
gccaaaactctgggtgtcctccccactacaacaattgaacagctggctgagcaatgtgct
gcacgctttgaacaagactcctacacactcagtgtatatatggatggtgttcaccggccc
ctggcctctacagagctggcactcagtgttaagaacagctaccaacctggagcctactgc
tttgtctatcaccctgttgaccaacccaacaaccagcctggtcgcagttgccccagtgac
ccacccccagccccacctacagagagcttcttcccagctgacaaagaagatgttgatact
gtggagccagagacggaagaggagagtctgattagcttgtaa
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