Lates calcarifer (barramundi perch): 108896109
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Entry
108896109 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: rab3 GTPase-activating protein non-catalytic subunit
KO
K19937
Rab3 GTPase-activating protein non-catalytic subunit
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896109
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108896109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAB3GAP2_C
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
108896109
NCBI-ProteinID:
XP_018550631
UniProt:
A0AAJ7QA14
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All DBs
Position
LG19:complement(3837579..3854089)
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AA seq
1369 aa
AA seq
DB search
MSCSLLEFCRLQELKTVRDFLFNSQKTEPVEEKTQSDNELSWDTSDWESAWDSGDNKEEE
ATSATVAEEETTGKSGPWLQDCVVSLSPCSDLLVVAREHKAVFLSAKWRTDDSGREEMTL
AVSWTGTLSTEEGECVSSSICIPLASQKRSSTGRPDWTCVVVGFTSGHVRFYTENGVLLL
AQLLHEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAALVTIDGFSLFQSLRACRNQVA
RAAAAGSDVIQPPPLAYKKWGLQDMDTIVDHSSVGVMTLCVFDQMKNASILGGFNASVKG
SPPAMSQYITVGGGPYTGFYYAVEGSSQPLLSHVALAVASKLTSALFSAASGWLGWNKNK
HEEEAVQKQKPKVEPATPLGIRFGLPDSRRHGESICLSPCNILAGVTDDFGRVTLLDLAR
GITIRMWKGYRDAQLGWLQVPEERGDREFSPSASLPRRHALFLVIYAPRRGILEIWAMQQ
GPRVGAFTVGKHCRLLYAGYRLMGVNSVTSQGWQLHTQQVCLLDPITGALRTVNIPFHLA
LSDKKSERAKDMHLLKRLTTLLRSREVEPDILESEAKSVLLDIKHPAIKKQALESLLANK
NAPVSCLTNITCTLYDTLKQQDPEEVDTDLLQLCSSQLKLLQLYTDIQQLHSAAGTEACS
EDDSLEGIKDDLSRVGPTLQRYAQFTPRPSVSFVQDSPDSPLPPQAFLSQMECTESGELK
VIRRSETEWNQLGNFLFWGCLCGKSPLHKVCDTLQQAGISPQQLLSLLLNVWLQREKEVL
QKSEETVRNLHTLLIALSNMKGAVEESWDPQSVSPWWQQVRSTCIQSHNAAAALLAAFVA
HRAAKASITSHADSKLQSEWEAVSLELEQWVVCVRQLEDVLVLQTLLLVPPPQGAAGGAA
AQCSIKTLLEGGTGGIADSVSKWVFRHSLAPERLKEILQKREDKEAEQKAGGEGNDEKQQ
SQKDTDRTAELLVAVCQRFPHSLSPDLLFAHCCWEYVVQWNKDPEEGQYLCWAVEHLKLV
SSPHIQLGISAMMWSTFIVKRFSAAAFLMEKVGKAPKDRLCRRDVGMGDKAVTSFLGCCV
QLLQILMESDSAVEEVSAPELSVEEVWCGAEGPASIAELALEQRGVHYPLVQHHCLLASL
LHATMTFSLKVKPLSLFDSKGKNAFFRDLTTIQLMPSGDMDPGLVSLRQEFLLRMLTGWV
QAIDDPSSSSSAGCPPLPSSGPKADWWPSLCLELGSLLQVNPDILRRHLVCELYNQGLDL
RAEEVMLEVEDKDVLGSQLLVLTGQRLSYSLLHSQSQTQAAMELLARLPPTLCTWLKAMD
PSELRCPLVPLSQTSRLVSRLIEILPENHAQYSLALHLLEAVEALTTED
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagcttattggagttttgtcggctccaagagctcaaaacagtccgggacttc
ttgttcaacagccagaaaaccgagccagtggaggagaaaactcaatcagataatgagttg
tcttgggacacatctgactgggagtcagcatgggatagtggcgacaacaaagaggaggag
gccacttctgccacagtggcagaggaagagaccacagggaagagtggaccctggctgcag
gactgcgttgtgtccctgtcgccatgctccgatctgctggtggtggcccgtgaacacaag
gcggtctttctctcagctaagtggcgcactgatgacagtggcagagaggagatgactctg
gctgtgtcttggactggaaccctcagcactgaggaaggagagtgtgtgagcagctccatc
tgtatccccctggcaagccaaaagaggagctccacagggcggcctgactggacatgtgta
gtagtgggtttcacctctggccatgtccgcttctacacagagaatggtgtcctgctcctg
gctcagctgctgcatgaggatcctgtattgagactcaagtgtcgcacatatgagatccct
cgtcatccaggagtaactgagcagcatgaggagttgagcatcctctaccctgctgctctg
gtcaccattgatggtttcagcctctttcagtctctgcgtgcctgcagaaaccaagtggca
agagctgcagcagcaggtagtgatgtgatccagcctcctcccctggcctataaaaagtgg
ggtctgcaggacatggacaccattgtggaccacagcagtgtgggcgttatgacactgtgt
gtgtttgaccagatgaagaatgcatctatcctggggggttttaatgcttcagtcaagggc
agcccccctgccatgagccagtatatcactgtaggaggagggccttacacaggcttttac
tatgctgtagaggggagctcccagcctcttctctctcatgtggctctggctgtggctagt
aaactcacctcggccctctttagtgctgccagtggctggctaggttggaacaagaacaag
catgaagaggaggctgttcagaaacagaagcccaaggtggagcctgcaacgcccttagga
atccgatttggtctgccagattcgcgtcgccacggagagtccatctgcctgtccccctgc
aacatactggctggagttacagatgactttggtcgagtcacactgctggacctggccagg
ggcatcaccatccgcatgtggaaaggttaccgagatgctcagctgggttggctgcaggtt
ccagaggagcggggtgaccgggagttctccccctctgcttccctccccagacggcacgct
ctattcctggtcatctatgctccccgcaggggaattctggagatatgggccatgcagcag
gggccccgagttggagctttcactgtgggtaaacactgcaggttgctgtatgctggttac
cgtctaatgggggtgaatagtgtgaccagtcagggctggcagctgcacacccagcaggtg
tgtctgctggatcccatcacaggagcactgaggacagtgaacattccatttcacctggcc
cttagtgacaagaagagtgagcgagccaaagatatgcacctgttaaagagactgactact
ttactaaggagcagagaggtggagcctgatattttggagagcgaagccaaaagtgtgctg
ctggatattaaacaccctgccattaagaagcaggctttggagtctctgctggcaaataag
aatgctcctgtctcttgtcttacgaacatcacatgcaccttgtatgacactctgaagcaa
caggaccctgaggaggtggatacagacttactccaactctgctcttcacagctgaaactg
cttcagctctacactgacatccagcagctgcactctgctgcaggcacggaggcctgctct
gaagatgactccctagaaggcattaaggatgacttgtcccgggttggccccaccttgcaa
cgctacgcgcagttcactccaagacccagtgtttcttttgtccaggactcgcctgattca
cctctgcctccccaagcctttctctcccagatggagtgcacagagagcggggagttgaag
gtgatccgcaggtctgaaacagaatggaaccaactagggaactttctgttctggggttgt
ctgtgtggaaaaagcccactccataaagtctgtgacacactacagcaagctggcatcagt
ccacagcagctactgtctttgctgctgaacgtgtggttgcaaagggagaaggaggtgctg
cagaaatcagaggaaactgttagaaacctacacacactactcatcgccctcagcaacatg
aaaggtgcagttgaggagtcatgggacccacagtctgtctctccctggtggcagcaagtt
cgctccacatgtatccagtcccacaatgctgctgcagctctgctggctgcctttgttgct
caccgtgctgctaaggctagcattaccagccatgctgacagtaagttgcagtcagagtgg
gaggccgtgtccctggagctggagcagtgggtggtgtgtgttcgccagctggaggatgtg
ctggtgctgcagactctgctgctggtgcctcctcctcagggagcagcagggggggctgca
gcacagtgctccatcaaaacgctgttggagggaggcactggtggcattgccgacagcgtc
tccaagtgggtgttcaggcacagcttggctcctgagcgactgaaggaaattctccaaaag
agagaagacaaagaagcagagcagaaggcaggaggagaaggaaatgatgagaagcagcag
agccaaaaggacacagacaggacagcagagctgttggtggcagtgtgccagcggttccca
cactcgctgtcacctgacctgctctttgcccattgctgttgggagtatgtagtgcagtgg
aacaaggacccagaggagggtcaatacctgtgttgggctgtggaacatttgaagttggtc
tccagtccacatatccagctgggtatttctgcaatgatgtggagtacgttcattgtcaaa
cgattctcagcagcagccttcctcatggagaaggtggggaaagcacccaaagatcgctta
tgtagacgagatgtcgggatgggagacaaagctgtgacgtctttcctgggctgctgtgtc
cagctgctgcagatccttatggagtcggactcggcggtggaggaggtgtctgccccggag
ctgtctgtggaggaggtgtggtgtggagcagagggccccgcctccatagctgaactggcc
ctggagcagagaggcgtccactaccccctggtccaacaccactgcctgttagcctccctg
ctacatgctactatgaccttcagtctgaaggtcaaaccactcagcctgtttgacagcaag
ggtaagaatgcgttcttcagagatctgacgacaatccagctgatgcccagtggagacatg
gacccaggcctggtctcactacgacaagagttcctcctgcggatgctgaccggctgggtg
caggctatcgatgatccttccagctcatcctcagctgggtgcccccctctaccatcgagt
ggccccaaggctgactggtggccctcgctgtgtctggagctgggatcactgctgcaggtc
aaccccgacatcctgagacgacacctcgtctgtgagctctacaaccaaggcctggacctc
cgtgcagaggaggtgatgttagaggtggaggataaggatgttctgggctctcagctgttg
gtgctgactggacagaggctgagctactcactgctccacagccagagtcagacgcaggct
gctatggagctgctggcccgcctgccccccaccctctgcacatggctcaaggctatggac
cccagtgagctgcggtgccccctggtccccctgtcccagaccagccggctggtcagccgt
ctcatcgaaatcctgccagagaaccacgcccagtacagcctggccctgcaccttctggag
gccgtggaggcactcaccactgaggactga
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