Lates calcarifer (barramundi perch): 108896111
Help
Entry
108896111 CDS
T04895
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00330
Arginine and proline metabolism
lcf00480
Glutathione metabolism
lcf01100
Metabolic pathways
lcf04148
Efferocytosis
Module
lcf_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
108896111
09106 Metabolism of other amino acids
00480 Glutathione metabolism
108896111
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108896111
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
108896111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
108896111
NCBI-ProteinID:
XP_018550633
UniProt:
A0A4W6CID1
LinkDB
All DBs
Position
LG19:4140058..4145636
Genome browser
AA seq
460 aa
AA seq
DB search
MNTAAPTEFEFQFLEEGFSARDIVEQKINESSMTDDRDAFYVCDLGDVRKKHLRWVRALP
RVTPFYAVKCNDSQAVVTTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQI
KYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIATDDSKAVCRLSVKFGAPLKACRGL
LERAKELGLDVIGVSFHVGSGCTDANSYTQAIADACCVFHMGDELGFNMNLLDIGGGFPG
VDDAELKFEEITAVVNPALDKYFPADSGVKIIAEPGRFYVASAYTLVVNIIAKKVIMDEE
SASDEEDEGTTDRTLMYYVNDGVYGSFNCILYDHAHCLPTLHKKPKPDETMYPCSIWGPT
CDGLDRIVEQCNLPDLQVGDWLVFENMGAYTVAASSTFNGFQRPDIHYVMSRPSWQQVQQ
ICSQGMPAPVEESCLFEVSACCGQESNLEMSTKPCQARVV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgctgctcccactgagtttgaattccaattcctggaggagggtttctctgcc
cgggatattgttgagcaaaagatcaatgagtcatctatgacggatgacagggatgccttc
tacgtctgtgacttgggagatgtgcggaagaagcacctgcgctgggtgagggccctgcct
cgtgtcactcccttctatgctgtcaaatgcaatgacagccaggctgtagttacgacactg
gcatccctgggaactggcttcgattgtgcaagcaagacggagattcagctggttcagtct
ctgggagtggatccaagcagaataatctatgccaacccctgcaagcaagtttctcagatc
aagtatgcgtctgcccatggggtccagatgatgacctttgatagtgaggtggaactcatg
aaagtggcccgctgccatgacaatgccaaactggtgctgcgtattgccacagatgactca
aaggcagtgtgtcgtttgagtgtgaagtttggggccccactgaaagcttgtcgaggtctt
ctggagcgggctaaagaactggggctggatgtgatcggcgtcagcttccatgttggcagt
ggctgcactgatgccaacagctacacacaggctatcgctgatgcctgctgtgtttttcac
atgggggatgagcttggcttcaacatgaatctcttggacattggtggtggttttcctggc
gtagatgatgctgaactcaaatttgaagagatcacggctgtagtcaacccagccctggac
aagtatttccctgctgactctggtgttaagatcatcgctgagccaggacgtttttacgta
gcttctgcttacacactggttgtcaacatcattgccaagaaggtcattatggatgaggaa
tcagcctctgatgaggaggacgaagggaccactgacaggactctgatgtactacgtcaat
gatggggtttacggttctttcaactgtatactctatgaccatgctcactgtttgccaacc
ctacataagaaaccaaagccagatgagaccatgtacccctgcagtatctggggcccaact
tgtgatggccttgatcgcattgttgagcagtgtaacctgcctgacctgcaggtcggtgat
tggctggtcttcgaaaacatgggtgcctacactgtggctgcctcgtccaccttcaacggc
ttccaaagacctgacattcactatgtcatgtcccgcccttcctggcaacaggtgcagcag
atttgttcccagggcatgccagctcctgtggaggagtcttgcctgtttgaagtatcagcc
tgctgtggccaagagagcaacttggagatgtccaccaagccttgccaggcccgggtggtt
taa
DBGET
integrated database retrieval system