Lates calcarifer (barramundi perch): 108896161
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Entry
108896161 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 33
KO
K10310
F-box protein 33
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108896161
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108896161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
108896161
NCBI-ProteinID:
XP_018550703
UniProt:
A0AAJ7VF46
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Position
LG19:complement(5661564..5679168)
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AA seq
495 aa
AA seq
DB search
MALCGGVGAMALPSELIVHIFSFLSDRDKLRASAVCSRWRECLFYPALWTELKLRIGGGC
NGGGSSSEETPRLEFLMRKFGSFVRELQLELAPVEGYLSPLNNDPSSTRMDQPPGADSDP
QLSERWRDAMATYLDQVLCVFTSIRNNRNLQKLSLYGDTCVLQQEGLLDSSNLHQIHQGD
KKINEIQQLFMELLSNSRQLRWLSCSFMLGLVTPCSLACLSNPSAETLQHLSLLDHQLGP
LISPSELDRLANLNSLALDFSDLTSELCGLLASPRRTPLHRLSLLLNGAALEFKPLEGTA
TEDDWKALVRVSANLRVYIMALEVDSSELLRVLKPSLPLERLHLDSYSTLVTDATLELIS
QQYNKTLTHFLLLRDDPDFPDLSVNRNEDPLVLLAWRCTQLAVLVIHGYTVWSHNLVAIS
RLRGSSLRVLTVSEESIDFDPDQSVCMEGDPVHNLVKEVSLGLGRVWHPCLDSSLVLSEP
TQHFHRELHAFSMGM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgcgggggtgtcggagccatggccttgcccagcgagcttatcgtccatata
ttctcctttctgtccgaccgagacaagctccgggcctcggccgtgtgttcacgatggagg
gagtgtctcttctaccccgcactgtggaccgagctcaaactgcggataggtggtgggtgt
aacggcggcggctccagctccgaggagaccccaaggctggagttcctcatgcggaagttc
ggttctttcgtgcgggagctgcagctggagctcgcaccggtggaaggctaccttagccct
ctgaacaacgacccgtcgtccaccaggatggaccagcccccaggtgccgacagcgacccg
cagctctccgagcgatggagagacgccatggccacctacttggaccaggtgttgtgtgtg
ttcaccagcatccgcaacaacagaaacctgcagaagctgagtctgtacggagacacctgc
gttctccagcaggagggacttttagacagctctaatctgcaccaaattcaccagggggac
aaaaagatcaatgaaatccagcagttgttcatggagttgctgtctaatagcaggcagctg
aggtggttgtcctgtagcttcatgctgggtctggtgactccctgctccttagcctgtctg
tcaaatccttcagctgagaccctgcagcacctcagtttactggaccaccagctaggcccc
ctcatctcaccatcagagttggatcggctagctaatcttaattctctggctctggatttc
tctgacttgacctctgagctctgtggtctgctggcatctccacgccgaactccattgcat
cgcctctccttgctgctcaacggtgccgccctggagttcaaaccattagaagggacagct
acagaggacgattggaaagcactggttcgtgtgagtgccaacctgcgagtgtacatcatg
gccctggaggttgacagctcagaactcctcagggtcctgaaacctagccttcctctggag
cgcctccacctcgacagttacagcacactggtgactgatgccacattggagctcatctct
cagcagtacaataaaacgctgactcacttcctgctcctgagggatgaccccgatttcccc
gacctcagtgtcaatcgcaacgaagacccactagtcctgttagcatggagatgcactcag
ctggctgtactggtgatacatggttacactgtgtggtcccacaacttggtggccatctct
cggcttcgaggctccagccttcgtgtcctgactgtctctgaggagagcatcgactttgat
ccagaccagtcagtgtgcatggaaggcgacccggtccataacctggtgaaagaggtctcg
ctgggccttggccgtgtctggcacccttgcctggattctagcctggttttgtcggaaccc
acccagcacttccaccgcgagctgcacgcctttagcatgggcatgtag
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