Lates calcarifer (barramundi perch): 108896170
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Entry
108896170 CDS
T04895
Name
(RefSeq) STAGA complex 65 subunit gamma
KO
K11316
STAGA complex 65 subunit gamma
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108896170
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896170
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108896170
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108896170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
Bromo_TP_like
Motif
Other DBs
NCBI-GeneID:
108896170
NCBI-ProteinID:
XP_018550719
UniProt:
A0A4W6F766
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All DBs
Position
LG19:4392046..4396282
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AA seq
432 aa
AA seq
DB search
MMRYWGEIPGPTGAPPSRSSFDLLQREFRSVEMQDPPLHQPSAQRPRPTTMLDIPSEPCS
LTIHTVQLCQHTRRLRALLAAAQAQAQGQSSASSEAGSRMEEGDTSLPLRPPTPPVMPDD
LLPVDSKAPRQPFQLRHSDPESDFYKGKGEPVTELSWPSCRQLLYQSVATVLAHAGFECA
QESVLETLTDLVHEHYLRLTRLLRVAVDREARLGASPFPDVVEQVFHEVGIGSVLALQRF
WQVRIKDYHSYMLQVSKDLSEEYERLVNPEKALEDSKPPRIKEEPMSDISFPVSEEPEAD
LASGDQALPMGVLGAHGERLASGLDGDHSPHTSGGGGASNSPLWPQVKMEPQDGEEGQGS
GHHHHHHHHSVLGGDVFEEGGPMSTMSESGGAMAPSPAGAASDGSYASHSPDSLMGTSPV
FNQRPKKRAKKM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctactggggagagatccctggacctacaggggcacctcccagccgcagctcc
tttgacttgctccagcgtgagtttcgctccgtggagatgcaggaccctcccctgcaccag
ccctcagcccagcgtccccggcccaccaccatgctggacatcccctcagaaccctgcagc
ctcaccatccacacagtgcagctgtgtcagcacacccgccgcctccgggccctcttggca
gcggcccaggcccaggctcagggtcagagctcagcgtcctctgaagcgggcagcaggatg
gaggagggtgataccagcctccctctacgtcctcccactccacctgtcatgccagatgat
ctgttacctgtggacagcaaagccccacggcaacccttccagctccgccacagtgaccct
gaaagtgacttttataagggtaaaggtgagcctgtcacagagctgagttggccctcctgc
aggcagctcctctatcagtcagtggccaccgtcctggcccatgctggcttcgagtgtgct
caggagagtgtgctggagactctgaccgacctggtccacgagcattacctgcgcctcacc
cgcctgctgcgggtggcggtggaccgggaggcacggctaggggcgagccccttcccagat
gtggtggagcaggtgtttcatgaggtgggcatcggcagcgtgctggccctgcagcgcttc
tggcaagtgaggatcaaagactatcacagctacatgctgcaggtcagtaaggatctgtca
gaggaatatgagaggctggtgaatccagagaaagctctggaggactccaagcccccgagg
ataaaggaggagcccatgagtgacatctccttccctgttagcgaggagccggaagctgac
ctggcctctggggaccaggctctgcccatgggggtcctcggggcccacggtgaaaggctg
gcttcaggcctggatggtgaccattctcctcacacctcaggtgggggcggagccagcaac
tcccctctgtggccgcaggtaaaaatggagccgcaggatggcgaggagggtcagggctca
ggccaccaccatcaccaccatcaccacagcgtcctgggtggagatgttttcgaggagggg
ggacccatgtccaccatgagcgaatcgggaggggccatggcgccctcacctgcgggagcg
gcgtcagacggcagctacgcctcgcactcacccgactccctgatgggcacgtcgcccgtc
ttcaaccagagaccaaagaaacgggcgaagaagatgtga
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