Lates calcarifer (barramundi perch): 108896175
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Entry
108896175 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: BEN domain-containing protein 3
KO
K27865
BEN domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896175
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896175
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Other transcription factors
Others
108896175
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
108896175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BEN
Motif
Other DBs
NCBI-GeneID:
108896175
NCBI-ProteinID:
XP_018550729
UniProt:
A0AAJ7VF84
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Position
LG19:5378179..5383302
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AA seq
817 aa
AA seq
DB search
MNFSEHGEVSDEAMLEKEHKHVQDVKEETEDYAICEQPEGLEGGSDGATEAGKRTSPEMG
PDSDQSTSSKRARVSGEMRRHLIDESSRQEPLCLTTTGEKRDCVQEKSRVSYRKPLFSIS
HRISEKRNTPSLEQQASHGAGNQLNYSSILSSKLHSPEENGLLETLPTTDTLGQASTTNS
SLYPLIEKMFFILNTLNSSMTQLHSKVDLLTLEVMRIKKQIKPADMVTEFQPPPEYLLTS
DELNQLMEQTSGAGELGCRLLVHLFPELFKARECSHECMASKRTLESLHLQLIRNYVEVC
YPSVKNNSVWQEECLLQINDFFNRFWAQRDMESARLLRKQTITSAGIKAEHPQTYRFINE
QGREEHIALDNQQSSLAVSELTFNTQVTEELDEFSSPEDFVIFLMHRLFPEVFEEGKMPE
GSSSFSSVGQLILDSDKMEIIRKYMEANFPDVPEDSWLQVCIQHMEDALEGPHSNGNGSE
PDNINDEGYDLASLPEDVSIIKVPEVSDYERPSRKSKKSLLTPVDFDNLEIPLPDFTVPQ
EYLLSREQLKNNYECSLSIGNFASRLLVLMFPELFTHENTRKQYNCSGSLGKKQLDPLRV
NLIRHYVQLVYPRAKNDRVWMLEFVGKLDERCRRRDTEQRRSYLQQRKVYGQESEQDFLC
QLNPDNIREDADIPSLPPEKSSKDFCKIPLDELTVSKPDFPVPSVYLLSDTEVREIVQQS
LSVGNFAARLLVRLFPELFTQENLRLQYNHSGACNKKQLDPVRLRLIRHYVEAVYPVDKM
EEVWHYECVPSIDERCRRPNRKKCDILKKAKRSSTVS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctctgagcatggggaagtttcagatgaagcaatgcttgagaaagaacacaag
catgtccaggatgttaaggaggagacggaggactatgctatttgtgagcaacccgaagga
ctcgaaggaggatctgatggggccactgaggctggtaaacgaacatctccagagatgggc
cctgattcagaccagtccaccagcagcaaaagagccagagtctctggcgagatgaggagg
cacttgatagatgagagcagcagacaggagcctctttgcctcaccacaactggagagaag
agggattgtgtccaggagaaatccagagtttcctacagaaagcctctcttcagcatctcc
cacaggatctcagagaagaggaacacaccaagtctggagcagcaggccagtcatggtgcc
ggaaatcagctcaactatagcagcatcctctcatccaagctccacagtccagaggaaaat
ggcctattggagaccctccccaccacagacactttaggccaagcttcaacaacaaactcg
agcctttatcctctgattgagaaaatgtttttcattctcaataccctcaattcaagcatg
acacaactgcatagcaaagtggatttgttaacccttgaagtcatgcggataaaaaagcag
atcaaaccagctgacatggtgacagagttccagcctcctcctgaatatctactaacaagc
gatgaattgaatcagctgatggagcagacatccggtgctggggagcttgggtgtcggctg
ctggtgcatctcttcccggagctgttcaaagccagggagtgctctcatgaatgcatggca
agcaagagaacactggagtctctgcatctgcagcttatccgtaactatgttgaggtatgc
tacccttcggtcaagaacaacagcgtctggcaggaagaatgtctccttcagattaatgac
ttctttaatcgtttctgggctcagagggacatggagagtgctcggctgctcaggaagcag
acaatcacaagtgctgggataaaggctgagcatccgcaaacctaccgtttcattaatgag
cagggtcgggaggagcatatcgctctagataaccagcaaagcagcttggctgtgtcagag
ctcactttcaatacacaagtcacagaagagctagatgagttctcctccccagaagacttt
gtcatttttcttatgcaccggcttttccctgaggtgtttgaagaggggaaaatgcccgaa
ggctccagcagtttcagtagtgtggggcagttgattctggactctgacaagatggaaata
atcagaaagtatatggaagcaaattttcctgatgtgcctgaggacagctggctccaggtc
tgcattcagcatatggaggacgcactcgagggtcctcacagtaatggcaatgggagcgaa
cctgacaatatcaacgatgagggctatgacttggccagccttccagaagatgtttctatt
attaaggttccagaggtaagcgattatgagaggcctagccgcaaatccaaaaagtcactg
ctcacacctgtggattttgacaatctggagattcctctacctgacttcactgtcccccag
gagtacctcttgtccagggaacagctgaagaacaactatgaatgtagcttgtcaattggg
aacttcgcctctcggctgctggtgctcatgttccctgagctcttcacccacgagaacaca
agaaagcagtacaactgcagcggatctcttgggaagaagcagcttgaccctcttcgcgtt
aatctgatccgtcattatgtgcagttagtctaccctcgggccaagaacgatagagtgtgg
atgttagaatttgtggggaaacttgatgagaggtgtaggagacgtgacacagagcagagg
agatcctacctgcagcaacgcaaagtttatggacaagagtcagagcaggactttctttgt
cagctcaatccagataatattagagaggatgcagatatcccctcgttacctcctgagaaa
agcagcaaagacttttgcaaaattcccttggatgaactgactgtatccaaacctgacttc
cctgtaccttctgtctacctgctctcagacactgaggtacgggaaatcgtccagcagagt
ctctctgttgggaactttgctgcccgcctgctggtgcgcctcttccctgagctcttcacc
caggagaacctgcggctgcagtacaatcattcaggggcctgcaacaagaagcagcttgac
cctgtgcgcctcagattgatacgtcactatgtggaagcggtgtatcctgtggataagatg
gaggaggtgtggcactacgaatgtgtgccaagcattgacgaacgttgccggcgccctaat
cgcaagaagtgtgacattcttaagaaggccaagaggtcaagcactgtgtcctag
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