Lates calcarifer (barramundi perch): 108896177
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Entry
108896177 CDS
T04895
Symbol
sobpa
Name
(RefSeq) sine oculis-binding protein homolog A isoform X1
KO
K27304
sine oculis-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108896177 (sobpa)
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Gene cluster
GFIT
Motif
Pfam:
SOBP
zf-FCS
Motif
Other DBs
NCBI-GeneID:
108896177
NCBI-ProteinID:
XP_018550732
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Position
LG19:complement(5303344..5342766)
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AA seq
902 aa
AA seq
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MAEMEKEGRPPENKRSRKPAHPVKREINEEMKSFAENTMNELLGWYGYDKVELRDSDNLD
IGETPQHISVLKENLLPKIPASTESSEGSPDRANSSQSLPASRNGVTEPSTTPSTSTPST
KEHGNLPIIVPMIPPPLIKPPADEDASNVQIMCAWCQKVGVKRYSLSMGSELKSFCSEKC
FAACRRAYFKRNKARDDDGLGGKLPQNSFTQDTPRLVFKTNSDVLVCDWCKHIRHTKEYL
DFGAGERRLQFCSAKCLNQYKMDIFYKETQAALPGALCNPGHGPGGEGKPECSGGVQLLT
PESWGTPLTDLRRKAPSPGGPSTTSVLASSTSSATSPSDTPAVCSPSSSSSAKIPTPRPH
ESPTLPPPPVPTLHPPVGVPPGSPPMVMTPRGPMPLPLFMEHQMMQQIRPPFLRPSAHPA
GPNSPLSNPIIPGIGPPPPPRTLGPASSPMHRPMLSPHVHPSSNPNPGMMPPHPGLPMPG
LPPFPPVNMMPNGPIPLPPMMNFGMPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPFN
PKTSRDQPESNGSVRSAPESSEASASGPHSPGSSGGDRGEQKVEPAGAERLSPVRSERGR
TALVDLTVKAEENSGNLCPTSSPKLMDGVIDLTVGQRSCQQQVIHRMLPGVQVKVEAEAE
SRSPPAAGLGREGKGSCDGGEGVLSQGLLSAPQLEGSTHPNTLESSGPPSPSGNADSPVS
QLNPSISNLTPPPLPSTARTQPQLQTSPGTPCNVIVNGTGWHSLLPPTIESCSDRKGDGV
AGEGEAEEQPANGELEREALKENNCSVGDWELGKRGSAQDEMANTVEGKPDPDSNLEEGE
HAYALPLLSTGGCVVIQPVPKPGADKTAILSCSISAPLSAAGSPELEPPLKRRCLRIRNQ
NK
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatggaaaaagagggcagacctccggaaaataagagaagccgaaaaccagca
cacccggtgaaaagggaaataaatgaagagatgaagagttttgcagagaacaccatgaac
gagctgctgggctggtacggctacgacaaggtggagctgagagactctgacaacctggac
ataggggagacgccacagcacatctctgtcctcaaagaaaacttgttgccaaaaatccca
gcttcaacagagagcagcgaaggctccccagatcgagccaacagctcccagtctttgcca
gcctccaggaatggagtcacagagccctccaccacgccgtccacctccacgcccagcacc
aaggaacatggcaacctgcccatcatagtccccatgatccccccgccactgatcaagccc
cctgcagatgaggatgcatccaatgtgcagatcatgtgtgcctggtgccagaaggtcggt
gtcaaacgctattctctgagcatggggagtgagctgaagagcttctgcagtgagaagtgc
tttgctgcctgccgcagagcctactttaaaagaaacaaggcgagagacgacgatggcctc
ggtgggaaattaccccagaacagctttactcaggacacgcccaggcttgtcttcaagaca
aacagcgatgtgcttgtgtgtgactggtgcaaacatattcgccacactaaggagtacctg
gactttggtgctggtgagcggaggctgcagttctgcagtgccaaatgcctgaaccaatat
aagatggatattttctacaaggagacccaggccgcgcttcctggagcactgtgtaaccca
ggacacgggcctggtggggagggtaagccagagtgcagtggaggggtacagctgctcact
cctgaatcctggggaacgccgttaacggacctacgccgtaaagctccctcacctgggggg
ccctccaccacctctgttttggcctcgtccacttcttctgccacctcaccctcagacact
cctgctgtgtgctccccatcctcctcctcctcagccaagatccccacacccaggccccat
gaaagccccacacttcctcctccacctgttcctactttgcacccaccagttggagttccc
cctggtagccctcccatggtaatgacaccacggggacccatgcccctgcctctgttcatg
gagcatcaaatgatgcagcagatccgtccaccgtttcttcgcccctctgcccacccagca
gggcccaacagtccactttcaaaccccatcatacctggcattggtccaccaccaccaccg
aggacccttggtccagcatcaagccccatgcacaggcccatgctgtctccacatgtccac
ccctcatccaatcccaaccctggcatgatgcccccccaccctggtctccccatgccaggc
ctaccccctttccctccagtcaacatgatgcccaatggacccatccccctgcccccaatg
atgaactttggcatgccatccttggctccattggtacccccaccaactcttttggttcct
taccctgttattgtacccctccctgtaccaatccctattccaatcccaattccctttaac
cccaaaacttccagggaccagccagagagcaatggctctgtccgcagtgctccagagtca
tcagaagcttcagcttctgggccccactctccaggttcctctggaggtgacagaggggag
cagaaagtagagccagctggtgcggagcgtctctctcctgtacgctcagagagaggcagg
acagcgttggtggacttgactgtgaaggcagaggaaaattctggcaacctgtgcccaacc
agcagcccaaaacttatggacggtgtgattgatctaacagttggccagagatcatgccaa
cagcaggtcattcacaggatgctacctggggtccaggtcaaagtagaggcagaggctgaa
tcaagatccccaccagctgctgggctggggagggaagggaagggcagttgtgatgggggg
gaaggagtcctctcacagggtctcctcagtgctccgcagctggaagggtccacacaccca
aacacactggaatcatcaggcccacccagcccttctggcaatgctgattctccagtgagc
cagctaaatccctctatctccaaccttaccccaccacccttacccagcacagcacggacc
cagccccaactccaaactagccccggcaccccatgtaatgttattgtcaatggtacagga
tggcattcgcttctccctcctaccattgagtcttgctctgaccgaaaaggagacggggtt
gcaggagaaggagaggcagaggagcagccagccaacggagaactggagcgtgaggcactg
aaagagaacaattgctcagtcggagactgggagctggggaaacggggctcagcacaagat
gagatggcaaacacagtagagggtaagccagaccctgactccaacctggaggagggcgag
catgcctatgccctgccgctgctgtctacgggaggctgcgtggtcatccagcctgtgcca
aagcccggtgctgacaagacggccatcctgtcctgttccatcagtgctcctttatcagca
gccgggagccctgagctggagccaccgctgaaaaggaggtgtctgcgaattcgcaatcaa
aacaaatga
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