Lates calcarifer (barramundi perch): 108896180
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Entry
108896180 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108896180
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108896180
09158 Development and regeneration
04382 Cornified envelope formation
108896180
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108896180
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108896180
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896180
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108896180
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108896180
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108896180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_13
EF-hand_1
EF-hand_5
DUF61
Motif
Other DBs
NCBI-GeneID:
108896180
NCBI-ProteinID:
XP_018550737
UniProt:
A0AAJ7Q9Y8
LinkDB
All DBs
Position
LG19:complement(5515621..5520721)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKEQQPHWSDILKRRIANSKKDERGEEEKKAEETELFTKYYTEWKGGNDKDQSYKNIPR
FYYRLPAEEEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQVPPVSGEEAMI
SYEAYLQVGEKAGPKCKKFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLS
LYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKI
KIQDILACSFLDDLLELRDEELSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEEL
SRYGTATLTSVFLDRVFQEYLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDMENQ
GYLNVFSLNYFFRAIQEQMKLHGQEPVSFQDVKDEIFDMVKPKDPYKITLQDLVNSCQGD
TVTSILIDLNGFWTYENREVLVANDNDSSNTADLDDT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaacaacagcctcactggtcggatattttgaaaaggaggatagcaaactcc
aaaaaagatgagagaggcgaagaagaaaagaaagcagaagaaactgagctgttcactaaa
tattacactgagtggaagggaggaaacgacaaagaccagtcctacaagaacatcccacga
ttctactatcggctaccagctgaggaggaagtattacttcagaagctgagagaagaatcc
agagctgtgttcctccagaggaagagcagagaactgttggataatgaggaactgcagaat
ctgtggttcctgctggataagcaccaggtacctccagtgagtggggaggaggcaatgatc
agttatgaagcctacctgcaggtgggggagaaggctgggcccaagtgcaaaaaattcttc
acagccagagtgtacgccaagctgctccacaatgacccttatggcagaatctccatcatg
cagttctttaactatgtcatgaggaaagtgtggctgcatcagacccggataggtctgagt
ctgtatgatgtggcaggacagggctacctcagagagtcggatctggagaactacatccta
gaactcatccctactctgcctcagctggatggactagagaagtccttctactctttctat
gtctgcaccgctgttcgcaagttctttttcttcctcgacccactccgaacaggaaagatt
aaaatccaggatatattagcttgcagttttctggacgacttgttggagctgagagatgag
gagctatctaaggagagtcaggagtccaactggttctcagccccatcagctctgcgagtc
tatggccagtacctcaacctggacaaggaccataacggcatgttgagcaaagaggagctt
tcacgctacggcacggccactctaacctcggtcttcctggacagagtgtttcaggagtac
ctcacctatgatggagaaatggactataagacctatctagactttgtgttggccttggaa
aacaggaaggagccagcagcattacagtatatctttaaacttctggacatggagaatcaa
ggatacctcaatgtcttctctctcaactacttcttcagggccattcaggagcagatgaag
ctgcacggtcaggagcctgtctccttccaggatgtcaaggatgaaatctttgacatggtg
aaacccaaagacccctacaaaatcactctccaggatctggttaacagttgccagggtgat
accgtcaccagcatcctgatcgacctcaacggtttctggacctatgagaacagagaagtc
ctggttgctaatgacaacgacagcagtaacacagctgacctcgatgacacctga
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