KEGG   Lates calcarifer (barramundi perch): 108896197
Entry
108896197         CDS       T04895                                 
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03030  DNA replication
lcf03420  Nucleotide excision repair
lcf03430  Mismatch repair
lcf03440  Homologous recombination
lcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108896197
   03420 Nucleotide excision repair
    108896197
   03430 Mismatch repair
    108896197
   03440 Homologous recombination
    108896197
   03460 Fanconi anemia pathway
    108896197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcf03032]
    108896197
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108896197
DNA replication proteins [BR:lcf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    108896197
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     108896197
   MMR (mismatch excision repair)
     108896197
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     108896197
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 108896197
NCBI-ProteinID: XP_018550747
UniProt: A0A4W6CIV1
LinkDB
Position
LG3:complement(1639885..1643823)
AA seq 122 aa
MAGVVDVPKPRINCSMLLQHISRPVCFVGRVEKVHPTGKTFTVSDGEGKIATVELNEPLE
EELSGIVEVIGIVSTKGVIMASMYNMLREDKGILFDLDLYNEALKVIHDFPQHYPFQVAS
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaggagtagtggacgtcccaaaaccgagaataaactgctcaatgctgttgcagcac
attagcagaccggtctgctttgttggacgcgttgagaaggtacacccgacaggaaaaacg
ttcaccgtctccgatggagaaggaaagatcgcaacagtggaacttaacgagccccttgaa
gaggagctgagtggcattgtggaggtgattggtatcgtgtccaccaagggagtcataatg
gcctcaatgtacaacatgctacgagaggataaaggcatcctttttgatttagatctctat
aatgaagccctgaaggtcatccatgatttcccccagcactacccttttcaagtggcttca
agtggatga

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