Lates calcarifer (barramundi perch): 108896220
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Entry
108896220 CDS
T04895
Symbol
six3a
Name
(RefSeq) homeobox protein SIX3a
KO
K19473
homeobox protein SIX3/6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896220 (six3a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108896220 (six3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
108896220
NCBI-ProteinID:
XP_018550774
UniProt:
A0A4W6F8H7
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Position
LG16_LG22:14144721..14148544
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AA seq
294 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFADRPLLLANSAPTTRSPEDLSMFQLPTLNFSPEQVASVCET
LEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
SLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPT
GMRSLSEAGLTPHSSAESPSTAASPTTSVSSMTERVDTGTSILSVTSSDSECDV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcgct
gatcgccctctgctcctggcgaacagcgctcccaccaccaggtctccagaagacttgtcc
atgtttcagctaccgaccctcaacttctccccggagcaggtggcgagcgtctgcgagacg
ctggaggagaccggggacatcgaacggctgggccgcttcctctggtccctgcctgtggct
ccgggagcatgcgaggcgatcaacaagcacgagtccatcctgcgcgcccgggccgtggtg
gcgttccacacggggaatttcagagacctctaccacatcctggagaaccacaagttcacc
aaggactcgcacggcaaactgcaggccatgtggctggaagcgcactaccaggaggccgag
aagctccgcggtcgtcccctcggaccggtcgataagtaccgggtgcggaagaagtttccg
ctgcctcggaccatctgggacggcgagcagaagacgcactgtttcaaagagcggacacgg
agcctgctgagggagtggtaccttcaggacccatatccaaaccccagcaagaaaagggaa
ctggctcaagccactggactcactcctacacaggtcggaaactggtttaaaaaccggagg
caacgagacagagccgcggcagccaaaaacaggctccagcaccaagcaataggaccgacc
ggtatgaggtccctctcggaggccggtctcacccctcacagctcggcagagtcgccctcg
accgcggccagtcccaccaccagcgtttccagtatgacagagagagttgatactgggacg
tccatcctgtccgtcacatccagtgactcggagtgcgatgtatga
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