Lates calcarifer (barramundi perch): 108896243
Help
Entry
108896243 CDS
T04895
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896243 (six2a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108896243 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
108896243
NCBI-ProteinID:
XP_018550797
UniProt:
A0A4W6F7A7
LinkDB
All DBs
Position
LG16_LG22:complement(14169383..14173171)
Genome browser
AA seq
290 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHTSPSPALLLGSNT
GLPSLHGLAPPPGPSAIPVPSGADSVHHHHSLHHDTILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcttccgacgtttggttttacgcaagaacaagtggcgtgtgtctgcgaagtc
ctccaacaaggggggaacatcgagaggctggggcgcttcctctggtcgctcccggcgtgc
gagcacctccacaaaaacgagagcgtcctcaaagcgaaagccgtggtcgcgttccaccga
gggaacttccgagagctctacaagatccttgagagccaccagttttcgccgcacaaccac
ccgaagctgcagcagctgtggctcaaggcgcactacatcgaagcggagaagctgagaggc
cgcccgctcggcgccgtggggaagtaccgcgtccggagaaagttccccctgccccgctct
atctgggacggagaagagaccagctactgcttcaaggagaagagcaggagcgtcctccga
gagtggtacacccacaatccgtatccatctccgcgggagaaaagagagctggccgaggcc
acgggactcaccaccacgcaggtcagcaactggttcaaaaacagacggcagagagaccga
gcagcggaggcgaaggaaagagaaaacaacgagaactccaacagcaatagtcacaaccca
ttgacttcttccatgaatggaaataaaactctattggggagctcggatgacgataaaacg
ccctcggggacaccggatcacacgtctccgagtccggctctgctactcggctcaaacacc
ggtttaccgtccctgcacggcctcgcgcccccgccgggacccagcgccatcccggtaccg
agcggtgcagactcggtgcaccatcaccactcgttgcaccacgacaccatactgaaccct
atgtcttctaatctagtggaccttggctcttaa
DBGET
integrated database retrieval system
