Lates calcarifer (barramundi perch): 108896283
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Entry
108896283 CDS
T04895
Symbol
tgif1
Name
(RefSeq) homeobox protein TGIF1
KO
K19383
homeobox protein TGIF1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108896283 (tgif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896283 (tgif1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108896283 (tgif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
108896283
NCBI-ProteinID:
XP_018550853
UniProt:
A0A4W6F2A0
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All DBs
Position
LG24:13306659..13311493
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AA seq
303 aa
AA seq
DB search
MKTKKGLMMLSGSETDDEDSVDAPLDLSSSTGSNGKRKRRGNLPKESVQILRDWLYEHRY
NAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPEMLRKDGKDPNQFTISRKGSKAGD
SFSDSSQSPKHSSPAASTEESYDKRVLHPSSFEPAMPSVLRKALSPSVPSPTSTSPSPGL
MPTRPSVICHTTVTAAMQASPTASHPPIPGMNCDRAAAELLQSAQALLRCQDEGLGSQPL
PAATTILSSAGMEGNLSPRSGLFNTPPPTPPDLTQDFSGFQLLVDVALKRAAEMELQAKQ
LVS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaaaaagggtttgatgatgctgtcagggagtgagacagatgacgaggacagc
gtggacgcccctctggatctgtcgtccagcacggggagcaacgggaagaggaaacggcgg
gggaacctgcccaaggagtccgttcagatcctcagggactggttgtacgagcaccgttac
aatgcttacccctctgagcaggagaaagccctcctgtccaagcagactcagctctccaca
ctgcaggtgtgtaactggttcattaatgcacggcggcgacttctcccggagatgctgagg
aaagatggcaaagatcccaaccagttcaccatatccaggaaaggtagcaaggctggcgac
agcttctctgacagctcccagtccccgaaacacagcagccccgcagccagtacagaggag
agctatgacaaacgtgttctccacccctccagctttgaacccgccatgcccagcgtccta
agaaaggcgctgtccccctccgtaccctctccaacctccacgtccccctccccggggctc
atgcccacccgcccttctgtcatctgtcacaccactgtcaccgcagcaatgcaggccagc
ccgacagcctcccacccacccataccgggaatgaactgcgacagggcagctgccgagctg
ttgcagtctgcgcaggcgctgctcaggtgccaggatgaagggctgggcagccagccgctc
cccgccgccaccaccatcctcagcagcgccggcatggagggcaacctgagcccccgcagc
gggctgttcaacacccctccccccacccctccagacctcacacaagacttcagcggcttc
cagctcctggtggacgtggccctcaaacgggccgcagagatggagctgcaagccaaacag
ctggtctcctaa
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