KEGG   Lates calcarifer (barramundi perch): 108896291
Entry
108896291         CDS       T04895                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
lcf04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108896291 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    108896291 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108896291 (chmp4c)
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108896291 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108896291 (chmp4c)
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108896291 (chmp4c)
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108896291 (chmp4c)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108896291 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   108896291 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF155 DUF3573
Other DBs
NCBI-GeneID: 108896291
NCBI-ProteinID: XP_018550863
UniProt: A0A4W6FJJ8
LinkDB
Position
LG24:complement(14068968..14071671)
AA seq 232 aa
MSKISKLFKGSSSSSSSSSSKSKHHKSRGGPSPQEAIHRLRETEEMLTKKQEYLEKRIEQ
EIVIAKKNGTKNKRAALQALKRKKRLEQQLTQIDGTLSTIEFQREALENSHTNTEVLKNM
GFAAKAMKKVHENMDLDKIDDLMQDITEQQDVAQEINDAISRPFGETFDEDELLAELAEL
EQEELEENMKTMGGLPSVPSSKVPSGRPSQRATTKKRVEEDDDMRMLASWAT
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagcaaaatatcgaaattattcaagggcagctccagctcgagttcatcgagctcttca
aagtccaaacaccacaagtcgcgggggggaccctctccccaggaggccatccacagactg
cgggaaaccgaggaaatgctgacgaagaaacaagagtatctggagaagaggatagagcaa
gaaatagtgatagccaagaagaatggcactaagaacaagagggctgctctgcaggccttg
aagaggaagaagcgcttggagcagcagctcacacagatcgatggcacactctccaccatc
gagtttcagagagaggctttagagaactcacacaccaacacagaggtcctcaagaatatg
ggcttcgctgccaaggccatgaagaaggtccatgagaacatggaccttgacaagatagat
gatctgatgcaggatatcacagagcaacaagacgtcgctcaagagatcaacgatgctatc
tccagacctttcggcgagacatttgatgaggatgagctgttggcagagctggcagagctg
gaacaggaggagctggaggaaaacatgaagaccatgggcgggctacccagtgtgcccagc
tccaaagtgccttctggacggcccagtcagcgtgcaacaaccaagaaaagggttgaagag
gatgacgacatgcgtatgttggcatcgtgggcaacttaa

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