Lates calcarifer (barramundi perch): 108896312
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Entry
108896312 CDS
T04895
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108896312 (dync2i1)
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Dynein and associated proteins
108896312 (dync2i1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
108896312
NCBI-ProteinID:
XP_018550898
UniProt:
A0A4W6FJ76
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All DBs
Position
LG24:13895830..13903627
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AA seq
1107 aa
AA seq
DB search
MHSDKKITKEDTWRPAELRRHIREEGRADDYARRRDDNERKHRGGESIEGRRRDPEREST
RERDKHGERESTRERKDEGRYAERSKEGSRDRRGDKGRDRRDERDKDKERRKERDRLVDG
NKYSDDYRENRDRRRDREEKQDRERDKERHRDKEKDRVRDRERHNEEDKEKRREERDKER
RREERDREHRTERERRRRDETGEGERDLTEKYDREQKDRHRERGQHKDEYGEKRSDKERQ
ERHRDRKHSERKEEREYREEHRRHKEERERRHKERGYHDEKQKRDSESREHRDLKGSGEE
ERHHRGQASERDKHKERRHREEEDPERKHRDRRHREEENPEKRHRDRGKREEEDLERNHR
DGSSSKKPASDKSHRQETNTMEKEEGDIASEHWTPSVKDVGDTEEPVVNDEDLADQEYED
DFEDYEEDFEELDESENEDEDEKEPEFPQVGEEREQLTAQKRKEIEAIQRAMNEENERVG
SAQSRQSTSRGEEDGPKWSRGSEKNQSRASQRGKFIDFVAAKQREVSKKVATKQKKRSTE
LLRLIDLDFSMTFSLLDLPPVSEYDMYIRTFGNANTKQAYVQCNEDNADRDIQTEEIEVS
EKWTQHPPEHNGACGDPNLSQEAREKNMNEMNFDSQRLTAFLRSASQVMVVLLEEDQAER
KSLRKLKTQVDALSFSDGSLQLNTKLPFLFGRHISLVHFSQVQRHTMMSVHMPTTKPSAV
RLDSCTIICIWNIWEPSRPQKILVYESEVQCCCFSPGKAILVFAGTSVGSVVLWDLREPA
ANHHRLKIGEDEWTFRQPTFSTDAVMAGSGHFSSVTSVEVVPSTVAGGLRPEVPLLASDE
ESSGLSFQLASLDESGVLNFWVVVELPKANESGSPTDLGLRPGGKVKLLHSSSLLTAERV
SPLDAVRTGPLQTLHLKFLPTDSNHFFIGTNMGLVNHGTSHGLKAPPKFYRFQEAGVRPV
DVSSIHFSPFRQNLFLVGCGDGSIRLHAVSHEQPVAEWQNSTAGEAVVSLQWAQTRPAVF
CVLDAASNLHIWDLVKNDTEPVVTERMSENRVTAMAVFGDSGKQNTYSGVALVYKSGKIE
MHYFTRNLTVPILAEEEKLDSMMTEAF
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgacaagaaaataaccaaggaagacacttggagaccagctgagctgagaaga
catatcagggaggaaggacgtgctgatgactatgccaggaggcgagatgacaatgagaga
aagcaccgtggtggggaatccatagagggacgccgcagagacccagagagggagtccaca
cgagagcgagacaagcacggggaaagagagagcacaagagagagaaaagatgaaggcaga
tatgcagagcgaagtaaagagggctcacgggacaggagaggtgataagggaagggacaga
agagatgagagggacaaagacaaggagaggaggaaggaaagggacagacttgtagatgga
aataagtacagtgatgactacagagaaaatagggacaggaggagggacagagaggaaaag
caggatagggagagagacaaagaaagacacagagataaggagaaagacagggtaagggat
agagagagacacaacgaggaggacaaggagaagaggagggaagagagagacaaggaaaga
aggagagaagaacgggacagagagcacaggactgagagggagagaaggaggcgcgatgaa
acaggagagggagaaagagatctgacagaaaaatatgatagagaacagaaagaccggcat
cgggagagagggcaacacaaagatgaatatggagaaaagaggagtgacaaagaaagacaa
gaaagacacagagacagaaagcattcagaacggaaagaggaaagagagtacagagaagaa
cacagaagacataaagaggagagagagaggagacacaaagagagaggatatcatgatgaa
aagcagaagcgtgacagtgaatccagggagcatcgagacttgaaggggtcaggtgaagag
gaaaggcatcatcgtggacaggcatcagaacgagacaaacacaaagagagacggcacaga
gaggaagaggatcctgagaggaaacacagagacaggaggcacagagaagaagaaaatcca
gagaagagacacagagacagggggaagagagaagaagaggacctagagagaaatcacaga
gatggatccagctccaagaaaccagcctctgacaaaagtcataggcaggagactaatacg
atggaaaaagaggaaggtgacatcgcttctgagcactggacacctagtgtgaaagatgta
ggagacacagaggagcctgttgtcaatgatgaagatttggctgaccaggaatatgaagat
gattttgaggattatgaggaagattttgaggagctggatgagagtgaaaatgaagatgag
gatgagaaggagccagagtttccacaggtgggagaagagagagagcaacttactgcacaa
aagagaaaggagatagaagcaattcagagagcaatgaatgaagagaatgagagagtcgga
tcagctcagtcaagacaaagtacgagcagaggggaggaagatgggcctaaatggtccaga
ggatctgaaaagaaccagagtcgtgcctctcagcgtgggaagtttattgactttgtggca
gcaaaacagcgcgaagtcagcaagaaagttgccacaaagcagaagaaacgcagcacagag
ctgcttcgcttaattgatttggatttctcaatgacgttctcccttttggatctgcctcct
gtcagtgaatatgacatgtatattagaacctttggaaatgcaaatactaaacaggcttat
gttcagtgtaatgaggataatgcagatcgagacattcaaacagaagagatagaagtgtct
gagaagtggacgcagcatcctcctgagcacaatggagcctgtggggatccaaacctctct
caggaagcacgagagaaaaacatgaatgaaatgaactttgattcccagcgtctgacggca
ttcctgcgctcagcctcacaggtcatggtcgtcctgttggaagaggatcaagctgagaga
aaatccctgaggaagttgaagactcaagtggacgcgctgtctttcagcgatggaagttta
cagctcaacactaagttgccttttctttttggtcgccacatcagcctggtgcacttctct
caggtccagagacacaccatgatgtcagtccacatgcctacaactaagcccagcgccgtg
cgtcttgacagctgcaccatcatttgcatctggaacatctgggagccatccagacctcag
aagatccttgtctacgaatctgaggtgcagtgttgctgtttcagccctggaaaggccata
ttagtgtttgcaggcacgtcagttggctctgtggtgttgtgggacctgagggagcctgct
gctaatcaccaccgcctgaagataggggaggatgagtggaccttcagacagcctaccttc
tccactgatgcagtgatggccggctcaggccatttctcatccgtgacgtctgtagaagtc
gtcccctccactgtagcaggcgggctgaggccagaggtccccctgctggcatctgacgaa
gagtcgtcaggattgtccttccagctggcttctctggatgaaagcggggttttaaatttc
tgggtggtggtggaactcccaaaagccaacgagtcaggctctccaacagatctagggctc
aggcctgggggcaaagtaaagttgcttcacagctcctccctcctcactgctgagagagta
tcaccactagatgcagtgagaacaggaccattacagactcttcatttaaagtttcttcca
actgactccaatcatttctttattggcaccaatatgggtctggtcaatcatggaacgagc
cacggtttgaaggctcctccaaagttttacaggtttcaggaagctggagttcgacctgtt
gatgtgagctcgatccacttttctcctttcagacaaaacctgttcttggtgggttgtggg
gatggcagcatcaggctgcatgcagtcagtcacgagcagcctgtggcagagtggcagaac
agtacagcaggtgaagcggtggtctcgctgcagtgggcacaaaccaggcccgcagtcttt
tgtgtactcgatgcagcctctaacctgcacatatgggacctggtgaaaaacgacacagag
cctgtggtcactgagaggatgtctgagaacagggtgacagccatggccgtgtttggagac
tcaggaaaacaaaacacatattcaggagtagctctggtctacaagtcaggaaaaatagaa
atgcattatttcacaagaaatttgactgtgcccattcttgcagaggaggagaagttggac
agtatgatgactgaagccttctga
DBGET
integrated database retrieval system
