Lates calcarifer (barramundi perch): 108896344
Help
Entry
108896344 CDS
T04895
Symbol
chtopa
Name
(RefSeq) chromatin target of PRMT1a
KO
K28424
chromatin target of PRMT1 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108896344 (chtopa)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896344 (chtopa)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108896344 (chtopa)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
CHTOP-methylosome complex
108896344 (chtopa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
108896344
NCBI-ProteinID:
XP_018550946
UniProt:
A0A4W6CBZ1
LinkDB
All DBs
Position
LG3:550913..556751
Genome browser
AA seq
246 aa
AA seq
DB search
MSAASSQKVVLKSTTKVSLNERFTNMLKNKQPTAVSIRATMQQQHLASARNRRLAQQMEN
RPSVQAALNHKQSLKQRLGKSNIQARLGRPVGALMRGGAALGRGGMRGMTRGSLRGRARG
GVMRGALSLRGKRVPTGAPMRGRGSAGRLVMRRGGRHRGGAAGRGGALSRGAARGGVARG
RGGLRGRGGFVGRGGRGRGRGRGIGRPAVTREQLDNQLDAYMSKTKGHLDAELDAYMAQA
DPDSME
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcctcctcccaaaaagttgtcctgaaaagcaccaccaaagtgtccctaaat
gagcgcttcactaacatgctgaagaacaagcagcccactgcagtaagcattcgagccacc
atgcaacagcagcatttggccagtgcccgcaatcgtcggttggcccagcagatggagaac
cggccctcagtgcaagctgctctgaatcataagcagagcctgaagcagcgcctggggaag
agcaacatccaggccaggctgggccggcctgttggggctctgatgcgtggaggagctgct
ctaggcagaggaggaatgcggggaatgaccaggggaagcctcagaggacgagccagagga
ggagtaatgaggggagctctgtccctgagagggaagcgagtgcctacaggtgcccccatg
cgaggccgtggctctgctggtcgcctggtgatgcgtagaggaggccgccatcgtggagga
gctgctggtagaggaggggctctgtcccgaggagcagcacgaggcggagtagccagaggt
cgtggtggactgcgtggtcgtggtggttttgttggccgaggtggtcgcggccgtgggcgg
ggccgcggtattggccgaccagctgtgacccgtgaacaactggacaaccagctggacgcc
tacatgtcaaagaccaaaggtcatttggatgctgagctggatgcctacatggcccaggca
gacccagacagtatggagtga
DBGET
integrated database retrieval system
