Lates calcarifer (barramundi perch): 108896409
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Entry
108896409 CDS
T04895
Name
(RefSeq) M1-specific T cell receptor beta chain-like
KO
K10785
T-cell receptor beta chain V region
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108896409
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108896409
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108896409
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Motif
Pfam:
C1-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
108896409
NCBI-ProteinID:
XP_050934312
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Position
LG19:20264448..20273252
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AA seq
323 aa
AA seq
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MLWYQQTKSGLMNLIGYNYIGSDPNYEKQFEHQFEITRENIRTGALIIPQFQHPESQAGR
EVIVFVLPQLAWNLHGGDVKNKYQALSTTSAQKKTKKGLTVVVLQSGDQVSHPGATVMME
CSMGSRAQHEQLHHVLPCISVNNYNPAYFGSGTKLTVLERNITQPTVTVFKPSLHECENK
NEKGTGVTKKKTLLCVASGFYPDHVSVSWKVDGKKVDKNVSTDSAAQLDGDFYRITSRLR
VPAKDWHNPKKYFQCIVSFFNGNETKHFEGSIKGEADPVKRAKYLKITQSAKLSYSVFIV
KSCIYGAFVVFLVWRLQGSAGKD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctctggtaccagcaaacaaagagtggtctgatgaatttaattggatataactacatt
ggcagtgaccccaactacgagaagcagtttgaacatcagtttgagattacgagagaaaac
atccgaacaggagctctgatcattccacagtttcagcatcctgagagtcaggccggcaga
gaagttattgtgttcgtattgcctcagcttgcttggaacctccatggaggtgacgtcaaa
aacaagtatcaagcactatctacaacttctgcccaaaagaaaaccaaaaaaggtctcact
gttgtagttctgcagtctggggatcaagtgtctcacccaggagccacagtgatgatggag
tgcagcatggggtccagggctcagcatgagcagctacaccatgtactgccttgtatcagt
gtgaacaactacaacccagcttactttggcagtggcaccaaactgacagtgttggaaaga
aatatcacccaaccaacagtgacagtgtttaaaccttcattacacgagtgtgaaaacaag
aacgagaaggggacaggcgttacaaagaagaagaccttactttgtgtggccagtgggttc
tacccagaccatgttagtgtgtcatggaaggttgatgggaagaaagtcgacaaaaatgtg
tcgactgacagtgctgcccagctggacggtgatttctacagaatcaccagcaggttgagg
gtccctgctaaagactggcacaaccccaagaaatacttccagtgcatcgtcagcttcttc
aatgggaatgaaactaagcattttgaaggctcaattaagggtgaagcagatccggtaaaa
agagcaaaatatctgaagatcacacagagtgccaaactctcctacagtgtttttatcgtc
aagagctgcatctatggagcctttgtagtgtttctggtgtggagacttcagggttcagct
ggaaaggactga
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