KEGG   Lates calcarifer (barramundi perch): 108896426
Entry
108896426         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 4C
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108896426
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     108896426
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     108896426
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108896426
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 108896426
NCBI-ProteinID: XP_018551068
UniProt: A0AAJ7VFG9
LinkDB
Position
LG5:complement(16183689..16210991)
AA seq 1607 aa
MAGAEVYTPANPTCKIMTFRPTMEEFSDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDDLMIDAPIQQMVAGQSGLFTQYNIQKKPLSVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVATQCTCSKDMVKISMEPFVKRFQPDRYANWMLGKDSTPIDHTLATPSTTPELQSWL
QRRRKTKPANKGSHSRMRSKRLRTSEEPVGLDGSSALSSSKRKSLGGPPGPKVRRSVATT
CKEEEKEKKKEAESKHNQNPNSVQLSDPCRQMCVVKVNRVESNSLGFSNKEPSHNSHCSL
LPRCIPGINESRCCPSEPQDLSTSQDCSIGVPHLEANKLSSSSHITSTSAETEMSLCPPD
CDGQTSSSSCREDTLSQTPNTVHSNMDTGTENYTNNTAKAEKMDTVVDPKHINPHSTTEA
LYDLKAEPAEGDSYTSCSSFSPSGQKCSLEKSSTEENLFPPLLQRNAVDMPQLTPEPVDK
DGICPLPPVLTQEMPSLTPADDGLTDVPKSRLCSHQVAPVLQRETPTGSLSSHGAKQEER
ETELMISKDSLTVKHASDWHLDSPFNCDGAAVSGLEGNTAHLTANAMHKITSGGVHEMLI
MPDIAAEKDHTKLENLTPGQSDATPGQLVQSDAPQTEQQSNLAELASKDKSKDPAQRDST
FSLSSAGSLLTGTSNNNPPDPSPPLCMQSDSHSALQLNHHTTYSPSHCTSQNPYMEPKPF
SSSIWKNLSSQGPAVLIQSLHPELPSDFTHDPLPYTMWTEPQCKEVTDLEDPDQDLRESE
NQEEEGGPLTWAQLEPTSLVSVGAVEPLGLCGDYELHRGEVDGPEALSLCRELGRQREAE
ESEHSGTVVSPLGMEGGEQDGASDMEEGGSEAEEAEQQSSAKGESSSDSSDEEEEEEEEN
DTSNYECDESGLEPGEVCAYPALSVKRTTKSWRHPLRKPTARAVPTAVKQQATSDDEPPE
ASLAEEEEQEMEVWAKPLVYLWQNRKSCFTAEREYNAHAATLQPYCAVCTLFMPYYQPED
KAEDNRPATAKDTSKSSSPMEGPTHPCQGLRRTKPLVPEICFSFREQNYPPTPTNPLLQE
DGTSPLLYCQGCCLQVHASCYGVAADDVSEQWSCDRCTEGSFTAECCLCNLRGGALKKTQ
NDKWAHVMCAVALPEARFSDEAKRSPIDTSRIPMQRYKLKCIYCRKRCAGKRQAGACIQC
SCGRCPTSFHVTCAHAAGVIMEPDDWPYVVSITCHRHQSRSSSAKQRACQASISLGQTVI
SKHKNLRYYSSKVTQITSQMFYEVMFDDGSFSNDTYPEDIVSRDCVNLGPPEVGEAVQVK
WPDGLFYGAKYLGSNVSYMYQVEFEDGSQVLAKREDVYTLDEDLPKKVKRRLSTASSMRF
QDAFFTTQGERKRQRTPNSRFQKDYVALPGLRTTAKSTWEQRSHKGK
NT seq 4824 nt   +upstreamnt  +downstreamnt
atggcgggagcagaggtgtacacccctgcaaaccccacctgcaagattatgaccttcagg
cccaccatggaggaattcagtgacttcaatcagtacctggtttatatggagtctcagggt
gcacaccgtgcaggcctggctaaggtgattcctcctaaaggctggaagccccgtcgcacc
tatgacgacatagatgatctgatgatcgatgctcccatccagcagatggtggctggtcag
tcagggctcttcactcaatacaacatccagaagaagcctctcagtgtgcaggagttcagg
cgactggctaacagtgacatgtactgtacacctcgctacctgaattatgaagatcttgag
aggaaatattggaagaacctcacttttgtctcacccatatatggtgctgatgtcagcggt
agcctctatgatgaggatgtagaggagtggaacattggccacctgaactccatcttggat
gttatcgaggaggactgtggtgtatccatccagggggtcaacactccatatctatacttt
ggcatgtggaagactaccttctcctggcacactgaagatatggacctgtacagcatcaac
tacctccacttcggcgagcccaagtcctggtatgccatcccccctgagcatgggaagaga
ctggagcgtctggctacaggtttctttcccaatagcttcaaggggtgtgaggcttttctt
cgtcacaagatgactctaatctccccctccatactgaagaagtatggcattccctttgat
aagattactcaggaagctggagagttcatgatcaccttcccttatggctaccatgctggc
ttcaatcatggcttcaactgtgcagagtccactaactttgctactgtgcgctggatagac
tatggcaaggtggccacacagtgcacatgtagcaaggatatggtaaagatatccatggaa
ccctttgtgaagcgttttcagcctgaccggtatgctaactggatgctgggcaaagactcg
acacctatcgaccacacacttgccactcccagtacaacaccagagctgcagagctggttg
cagaggcgccgcaagaccaaacctgctaataaaggcagccactctcgtatgcgctccaag
cgcctcagaacctcggaagagcctgtaggtctggatggcagctcggctctgagcagcagc
aagaggaaaagcctgggtggtccgcctgggcccaaggtgcgaaggtctgtagcaacaacc
tgcaaggaagaagagaaagagaagaaaaaagaagctgagtcaaagcacaaccagaatccg
aactctgttcagctttctgatccctgcaggcagatgtgtgtggtcaaggtaaatcgggta
gagagtaatagtttgggattttccaacaaggagccatcccataactctcactgcagtctg
ctacccagatgcatccctggaattaatgagtcaaggtgctgcccttctgaaccacaagat
ctctcaacttctcaggactgctctattggagtcccacacctggaggccaacaaactcagc
tcatcttcccacataacaagcacttctgctgagactgagatgagcttgtgtccacctgac
tgtgatggtcagacatctagttcctcatgtagagaagacactttaagccaaacgccaaac
actgtccatagcaacatggacacaggtactgagaattacactaacaacactgctaaagca
gaaaaaatggacacagttgttgatccaaaacatatcaatccacactccaccacagaagca
ctttatgatctcaaagctgagccagcagagggggatagttacacatcatgtagttccttc
tccccttcaggacaaaaatgcagtttagaaaaaagcagtactgaggaaaatctcttccct
cctctgctacagaggaatgcagtggatatgccacaactcactcccgagccagtcgataag
gatggaatctgccctttgccacctgtactgacacaagagatgccctccctcaccccggct
gatgatgggctaactgatgtcccaaaatctagattgtgcagtcaccaggttgcacctgtg
ctacagcgagagacgccaactggctctttgtcttcacatggagccaaacaggaagagaga
gagactgaattaatgatatcaaaagactctcttaccgtaaaacatgccagcgactggcat
ctagattctccatttaattgcgatggggcagcagtgtctggtttagaaggaaacacggct
catttaactgccaatgctatgcacaaaataacatctggtggtgtccatgaaatgctaata
atgccagacattgctgcagaaaaggatcatacaaagctggaaaatcttactcctggacag
agtgatgctacccctggccagctagttcagagtgatgcaccgcaaacagaacagcagtcc
aacttagcagagttggcaagtaaagataagtccaaagatccagctcaaagagacagcaca
ttcagtctgagcagtgctggctctcttttgactggtacctcaaacaataatcctccagac
ccttcccctccattatgcatgcaaagtgacagccactcagcattacaactaaaccaccac
actacatactcaccttcacattgtacttcccagaacccatacatggagcccaaaccattc
tccagcagcatctggaaaaacctcagttcccagggtcctgcagtactcattcagagtctg
cacccagagctcccttctgacttcacccatgaccctctaccatacaccatgtggactgaa
cctcagtgcaaagaggtcacagacctggaggacccagaccaagacctccgtgagtcagag
aaccaggaagaggaaggtgggcctctcacctgggcacagctcgagcccacctctctagtt
tcagttggtgctgtagaacccctggggctttgtggagattacgagctccacagaggggaa
gtagatgggcctgaggccctctccctgtgcagggagctggggagacaaagggaggcagag
gagagtgaacattcaggtacagtagtttcacctcttgggatggaaggaggagaacaggat
ggggcgtctgatatggaagaagggggatctgaagccgaagaggcagagcagcaaagtagt
gccaagggagagagcagtagtgactcctctgatgaggaggaagaagaagaggaggaaaat
gatacgagtaattatgagtgtgatgaatcaggcctggaacctggggaggtttgtgcttac
cctgcactgtcagtgaagaggaccactaagagctggcggcacccactcaggaaacccact
gcaagggctgtacccactgctgtcaaacaacaggccaccagtgatgatgagccccctgaa
gcaagcctggcagaggaggaggagcaggaaatggaagtgtgggcgaagcccctcgtctac
ctgtggcagaacaggaagagttgcttcacagctgagagggagtacaacgctcatgcagcc
accttgcaaccatactgtgcggtgtgcacactcttcatgccatactatcagcctgaagac
aaagcagaggataacaggcctgccactgctaaggacacctccaaatcttcctcccctatg
gagggccccacacatccctgtcaaggtctgaggagaaccaagcccctcgtcccagagatc
tgcttttctttccgggagcagaactaccccccaactcccaccaaccctctgctgcaggaa
gatggcacctcccctctgctctactgccagggctgttgcctgcaagtccatgcgagttgc
tatggtgttgccgcagatgacgtcagtgagcagtggtcgtgtgatcgctgtacagaagga
agctttacagcagaatgctgtctctgtaacctcagaggtggagcactgaagaaaacccaa
aacgacaaatgggcccatgtgatgtgtgcagtagcactgccagaggcgaggttcagcgat
gaagccaagaggagtcccattgacactagtaggatccccatgcagcgatataaactgaag
tgtatctattgtcgtaaacgctgtgcggggaagcggcaggcaggcgcttgcatccagtgc
tcatgtggccggtgtcccacctcctttcatgtgacctgtgcccatgctgctggtgtaatc
atggagcctgatgattggccatatgttgtgtcaatcacctgccatagacaccagtcacgg
agttcgtcagctaagcagcgagcgtgccaagcgtccatctcactgggccagacagtgatc
tccaaacacaagaacctgcgctactacagctccaaggtcacacagatcacctcccagatg
ttctacgaggtcatgtttgatgacggctccttctccaatgatacctaccccgaggatata
gtgagcagagattgtgtgaacttgggtcctcctgaagttggagaagctgttcaagtgaaa
tggcctgacgggctgttctatggtgctaaatacctgggatccaacgtctcctacatgtat
caggtggagtttgaggatgggtctcaggtgctggcaaagagagaggatgtctatacttta
gacgaagacctgcctaaaaaggtgaaacgtagactttccacagcctcaagcatgcgtttc
caagatgccttctttaccacgcagggtgagaggaaacggcagaggacacctaattctcgc
ttccagaaagactatgtggccctgccaggcctccgtacaactgccaaaagcacatgggag
caacgcagccacaaagggaaatga

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