Lates calcarifer (barramundi perch): 108896449
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Entry
108896449 CDS
T04895
Name
(RefSeq) structural maintenance of chromosomes protein 2
KO
K06674
structural maintenance of chromosome 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896449
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
108896449
Condensin II
108896449
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
CCDC39
AAA_29
GrpE
Motif
Other DBs
NCBI-GeneID:
108896449
NCBI-ProteinID:
XP_018551109
UniProt:
A0AAJ7QAU8
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All DBs
Position
LG5:complement(16229587..16237924)
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AA seq
1203 aa
AA seq
DB search
MHIKSIIVEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTHVRAS
NLQDLVYKNGQGGITKATVSITFDNSNKSQSPLGFETHDEITVTRQVVIGGRNKYLINGV
NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYECKKIS
AQKTIEKKEAKLKEIQTILDEEITPTMQKLQEERSSYLEYQKLMREIQHLSRLYVAWLFV
CAEETKVKSAENLKVMQDNIAKMQATMAENESKVQELSAQIQELQKKKDQEVNGVLKSLE
EALADVQRVDTKAQSALDLKKQNLKDEMKKKKELVKSMEEDKKMLTVKEKEVSKLAEQLK
TLQEEGQKDSAALEAAEQHFKAVSAGLSTNEDGEEATLAGQMMACKNDMSKADTEAKQAQ
MTLKHAQTELKTKQAEVKKMDSGYKKDQDNFQAVRSSREKLEAELAKLNYEDGKEESLLD
QRRQLSREVAKLKETYERLVSRFPNLRFHYKDPERGWDHSKVKGLLANLITVRDVSYATA
LEVVAGGRLYNIVVDTEVTGKKLLEKGELQRRYTIIPLNKISAKTLNDKVVNTAKSLVGE
DNAHTALSLVGYESDLRKAMEYVFGSTLVCDTLDNAKKVAFDKQVMTKTVTLGGDIFDPQ
GTLSGGARSQSASVLTSLQELKEVQDNLREKEAQLHDTERQLAGLKGTAEKYRQLKQQHE
LKVEEEQILQAKLQQSSFHQQQEELERLRKAIEESEETLRVSKEVQKRAEEKYKVLENKM
KNAEAEREKELKAAQQKLNTAKSKADAFNKKLKQKQQESDAVALELEELRREQTGYEQQI
QAVDEAMKAIQEQIDSMSCTVSQNKVFVRPVRKAQEELAKQKEVIMAQDKELKGKSSEAN
KIREQNNEVQLKIKELEHNISKHRKDSQDAADKVTRMLEEHDWIHSERQFFGQPNTSYDF
KTNNPREAGQRLKKLEETTSKLERNVNKRAMNMLNEAEERYNDLMKKKRIVENDKAKILQ
TIEELDQKKNEALNLAWQKVNKDFGSIFSTLLPGATAKLAPPQGCGVLEGLEFKVALGNT
WKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFRH
SQFVVVSLKDGMFTNANVLFKTKFVDGMSTVSRTALSQSDTNLPQKGQDKARQKDKRNKQ
LIS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaagtcaattattgttgaagggttcaaatcctacgcgcagaggacagagatc
aacggctttgacccgctgttcaacgccatcacaggactgaacggcagcggcaagtccaat
attttggactcgatatgctttcttttgggcatttccaatctcacccatgtgcgagcctct
aacctccaggacttggtgtacaaaaatggacagggtggcatcaccaaggccaccgtgtct
attacttttgacaactccaacaaaagccagagtcctcttgggtttgaaacccacgacgag
atcaccgtcaccagacaggtggtgattggtggcaggaacaagtacctaatcaacggagtt
aatgctaacaacaccagggtgcaggacttgttctgctctgttggcctcaatgtcaacaat
ccacactttctcatcatgcaggggaggatcaccaaggttctaaatatgaagccaccagag
atccttgccatgattgaggaggcagcaggcacaaggatgtatgaatgtaaaaagattagt
gctcagaaaaccattgagaagaaggaggccaagctgaaggagattcagactattttggac
gaagaaattactccaaccatgcagaaactgcaggaggaacgatcatcatacctggagtac
cagaagctgatgcgtgagatccagcatttgtcgcggttgtatgtggcctggctgtttgtg
tgcgcagaggagaccaaggtgaagtcggcagagaatctgaaggtgatgcaggacaacatt
gccaagatgcaagccaccatggctgagaatgagagcaaagtccaggagctctcagcccag
attcaggagctgcagaagaaaaaagaccaggaggtgaatggagtattaaaatccctagag
gaggctttggctgatgtgcaacgtgttgacaccaaagcccagagtgcccttgacctcaaa
aaacagaatctcaaagatgaaatgaagaagaagaaggagcttgtgaagagtatggaggag
gacaagaaaatgcttacggtaaaggaaaaggaggtttctaagttggcagagcagcttaag
actctacaggaggagggacagaaggatagtgctgctcttgaggcagctgaacagcatttt
aaggctgtgtctgcaggtctctccaccaatgaggatggagaggaggcaacactggctggg
cagatgatggcctgcaagaatgacatgagcaaggcagatactgaggctaagcaggcccag
atgacactgaaacatgcccaaactgaactgaagaccaaacaagcagaggtgaaaaagatg
gacagtggctacaagaaggaccaggacaactttcaggctgtcagaagcagcagggagaaa
ctagaggctgagctggctaaactcaactatgaagatgggaaggaggaaagtctgctggac
caaagaaggcagctgtccagagaggtcgctaaacttaaagagacctatgagcgtcttgtg
tcccgcttccccaacttgcgcttccactacaaggacccagagcgaggatgggaccatagc
aaagtgaaggggctgctagctaacctgatcacagtccgtgacgtctcatacgcaacagca
cttgaggtggtagcaggaggccgactttataacattgtagttgacacagaggtgaccggt
aaaaagctgctggagaagggagagctgcagcggaggtacaccatcattcccctcaacaag
atctctgccaagacacttaatgacaaagtggtcaacactgccaagagcctggttggagag
gataacgcccacactgctctgtccctggtgggttatgaatctgacctgcgtaaggccatg
gagtacgtctttggttccacgttggtgtgtgacaccctggacaatgccaaaaaagtggct
tttgacaagcaggtgatgaccaagactgtcactcttggaggggacatcttcgacccacag
ggaactctgagtggaggtgctcgctcccagtcagcatcagttctgaccagtctgcaggag
ctgaaggaggttcaggacaacttgagggaaaaggaggcccagcttcatgatactgagcga
caactggccggccttaagggaacagctgagaagtaccgtcagctgaagcaacagcatgag
ctgaaggtagaggaggagcagattttgcaggccaagctgcagcagagctccttccaccag
cagcaagaggagctggagaggctgcgcaaggccattgaggagagtgaggagactttgcgt
gtctctaaggaagtgcagaagcgtgctgaagaaaagtacaaggtgttggagaacaagatg
aagaatgctgaggcagagagagagaaagagctgaaagccgcccagcagaaactcaataca
gccaagagtaaagctgatgccttcaataagaagctgaagcagaagcagcaggagtctgat
gctgtggccctggagctggaggaactgcggagggaacaaactggttacgagcagcagatt
caggctgtagatgaagccatgaaggccatccaagagcagatagacagcatgtcctgcact
gtatcccagaacaaggtatttgtgaggccagtgcgcaaagcccaggaggagctggccaaa
cagaaggaggtgatcatggctcaggacaaagagctcaaggggaagagcagtgaggctaat
aagataagggagcagaacaatgaagtccagctgaagataaaggagctggagcacaatatt
agtaagcaccgcaaagacagccaggatgctgctgacaaggtgactcggatgctggaggaa
cacgactggatccactcagagcgccagttcttcggtcagccaaacacctcgtacgacttc
aagaccaacaacccccgcgaggcaggccagaggctgaagaagctggaggagaccaccagc
aagctggagagaaacgtcaacaagagggccatgaacatgctgaacgaggcagaggagagg
tacaatgacctgatgaagaagaagaggatagtggagaacgacaaagcaaaaatcttgcag
accattgaggagctggatcagaagaagaatgaggctctcaacttggcatggcagaaggta
aataaggactttggctccattttctccactctgctaccaggggccactgctaaactggca
cctccccagggctgtggtgtcttagagggccttgagtttaaggtggccttaggaaacacc
tggaaggagaacctcactgagctcagcggtgggcaaagatcactggtggccttgtctctc
atcctcgccatgctgctgttcaaacccgctcctatctacatcttggatgaagtggatgct
gctctggatctttcacacacacagaacattggacagatgctccgcacacattttagacac
tcccagtttgtggtggtgtccctaaaggatggcatgttcaccaatgccaacgtcctgttc
aagacaaagttcgtcgacggcatgtccacagtgtcgcggaccgcactcagccagagtgac
accaacctcccccagaaaggccaagacaaagctcgtcaaaaagacaagaggaacaaacag
ctcatcagttaa
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