Lates calcarifer (barramundi perch): 108896458
Help
Entry
108896458 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: KIT proto-oncogene, receptor tyrosine kinase b
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108896458
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108896458
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108896458
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108896458
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108896458
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108896458
CD molecules [BR:
lcf04090
]
Proteins
108896458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
108896458
NCBI-ProteinID:
XP_018551119
UniProt:
A0AAJ7QAJ7
LinkDB
All DBs
Position
LG5:complement(16264587..16283298)
Genome browser
AA seq
954 aa
AA seq
DB search
MRCHWVIFASHFLLLPLTVWCEPIISPEGPHVVVPKRGKLELRCHDNATTPGAPSGLRWQ
RERARRLEGEVEEGGVVYVRVPSVQAFHMGRYVCVNNSTLEHSSIYVYVKDSQNAFQRTM
VNVILVRAGENCTIPCLVTDPEVTLLALETCDGRPLPFSMSYHSNLQRGIIISNVRKEHE
GCYVCVGQLGGIKVTSTQYTVDVRLVPVVPPVITLSHKDRVILRKGEKFELTCSSTNVNP
DFSLKWDFPPAVHPNESQTSHILSGSRGYERSTMLLITAVNQSDSGTYRCYAHNERGTSA
IALQLNIFDQGFITMLGSPGPVQADVKEGESLSLRVEFDAYPSPRSLFWSYNGRRLLNTT
EHVITVHRRKYRYISELRLVRVLGSEGGIYKFSAGHEDASVDHSFHVYVNSKPVIIAQEG
PIDGQVRCIAAGYPVPKISWYFCELPHTRCSHLPNATQWENPEVTMVTESAFGRSEVESR
LNVSKEHTHYHTLECVASTEGEEAYTLFSISERIVPHKLFTPLLTGMVATGILLSLILVV
LLYKYIQKPKFQIQWKVIESIHGNNYIYIDPTQLPYDSKWEFPRQKLRFGKTLGSGAFGK
VVRATAYGLCSADTITTVAVKMLKPNAHSTEKEALMSELKVLSYLGNHVNIVNLLGACTV
GGPILVITEYCCYGDLLNFLRRKRRSFLNSQGGDGYYRNVLNQSEPTREVIGAGYMPMRP
SEKERSSQSDDIDELSLDAEDLLSFSYQVAKGMEYITSKNCIHRDLAARNILLTHGRVAK
ICDFGLARDITTDASYVLRGNARLPVKWMSPESIFDCVYTFESDVWSYGILLWEIFSLGN
SPYPGMQVGSVFYRMIQEGHRMSRPEFAPIEMYDMMLSCWNHDPLKRPSFRKLVERTELL
LSENTKNVYLTLSNAPGPPEQQRASSRRLSSVCSTTAPTQPLLQSTADVFLDYV
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgccactgggttatttttgcctcacattttcttctgctgccactaacagtgtgg
tgcgagccaatcatctccccagaagggcctcacgtagtggttcccaagagggggaagctg
gagctgcgttgccatgacaacgccacaacgcccggcgccccgtccggcttgaggtggcag
cgggagagggctcgcaggctggagggagaggtggaggagggtggggtggtttatgtcagg
gtgccgtcggtgcaggccttccacatgggtcgttacgtgtgcgtcaacaacagcacactg
gaacacagctccatctatgtttatgtgaaagactcccagaatgccttccagcgcaccatg
gtgaacgtcattctggtgcgagcaggtgagaactgcaccatcccctgtcttgtgaccgac
cctgaggtcaccctcctcgctttggagacttgtgacggacgacctttgcccttcagtatg
agttaccacagcaacctccagcgaggcatcatcatcagcaatgtgagaaaggaacacgag
ggctgttatgtgtgtgtgggacagctcggtggaatcaaagtgacgtctactcaatacact
gtggatgtacgacttgttccagtggtgcctcccgtgatcacactgtcccataaagacaga
gttatcttgaggaaaggagagaagtttgagcttacctgtagctccaccaacgtcaaccca
gacttcagtctcaagtgggacttccctccagcagtgcatccgaatgaatctcaaacctca
cacatcctgtccggttcacgtggttatgagagatccaccatgctcttaatcacagctgtc
aaccaatcagactcaggcacctaccgctgctacgcccacaacgagagaggcaccagtgcc
atagcgcttcagctgaacatctttgatcaggggttcatcaccatgttaggaagcccaggt
ccagtacaggcggatgtcaaggagggagagagcctgagcctgagagtagagttcgatgcc
tatccctcacccaggtccttgttttggtcttacaacggcaggcggctcctcaacaccaca
gagcatgtcatcactgtccaccgccgcaaatacagatacatcagcgagctgagactagtg
agggttctcggctcagagggcgggatctataagttctcagccggtcatgaggatgcatct
gtcgatcattcattccacgtgtacgttaacagtaagcctgttatcatcgcccaggagggg
cccattgatggacaggtgcgatgcattgctgcaggttacccggtccctaaaatcagctgg
tacttctgtgagctgccccacacgaggtgctcacacctgcccaatgccacccaatgggag
aatccagaggtcaccatggtgacagagtctgcatttggcaggagtgaggtggagagccga
ctgaacgtcagcaaggagcacacacactaccataccctggagtgtgtggcaagtacagag
ggggaagaggcctacacactcttctccatcagcgaacgcatcgtcccccataaactcttc
actccccttctaactggcatggtggctactggcatcttactcagcctcattctagtggtg
ttgctctataagtacatacagaagccgaagtttcaaatccagtggaaggtcatcgagagt
atccatggcaacaactatatttatattgaccctacccagctgccgtatgactccaaatgg
gagttccctcgtcagaaactacgctttggtaaaaccctgggctctggggcttttggaaag
gtagtgagggccacagcgtatggactctgctctgcagatactatcacaaccgtcgctgtt
aagatgctcaaacccaatgctcactccacggagaaggaggcactgatgtcagagctgaag
gttctcagttaccttggaaaccacgtgaacattgttaacctgctgggagcctgcactgtc
ggaggcccaattttggtgatcactgagtactgttgctatggcgaccttctcaacttcctg
cgcagaaaaagaaggtccttcctcaattcccaaggtggtgatggttactatcgcaacgtc
ctgaaccaatccgagcctacaagagaggtgattggtgcaggatacatgcccatgcgtccc
tctgagaaagaaaggtcttcccagtcagatgacatagacgagctgtcgctggacgctgaa
gatctcctcagcttttcctaccaggtggccaaaggaatggagtacattacttctaagaat
tgtattcacagagatcttgctgccagaaacattctgctgactcatggcagggtggcaaaa
atctgcgactttgggctggcacgagatatcaccactgatgccagctatgtgctccgaggc
aatgctcgtctgccggtcaagtggatgtctcccgagagtattttcgactgtgtctacacc
tttgagagtgacgtgtggtcctatggcatcctgctctgggaaatcttctctctgggtaac
agtccataccctgggatgcaggtgggctcagtattttataggatgattcaagagggccac
aggatgagtaggcctgagtttgctcccattgagatgtatgacatgatgctgtcctgctgg
aatcacgatcctttgaaaaggccttcgtttaggaaattggtggagaggactgagctgctg
ctgtctgaaaacacaaagaatgtgtacttgacactgagcaacgctccaggtcctcctgag
cagcagagggcgtcatcacggaggttgagctctgtctgcagcacgacagcacccacccag
cctttattgcagagcacggctgacgtcttcctggactatgtctga
DBGET
integrated database retrieval system
