Lates calcarifer (barramundi perch): 108896476
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Entry
108896476 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: tachykinin receptor 3a
KO
K04224
tachykinin receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108896476
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108896476
04082 Neuroactive ligand signaling
108896476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108896476
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Tachykinin
108896476
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
108896476
NCBI-ProteinID:
XP_018551137
UniProt:
A0AAJ7QAV8
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Position
LG5:13127287..13152128
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AA seq
412 aa
AA seq
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MAAPHNGSNITANYTNQFVQPPWRVALWSVAYSSVLAVAVFGNLIVIWIILAHKRMRTVT
NYFLLNLAFSDASMAAFNTLINFIYAAHGEWYFGEAYCKFHNFFPVTSVFASIYSMTAIA
VDRYMAIIHPLKPRLSAKATTGVIVCIWSLAVVLAFPLCYFSTTRXALPNRTVCYVAWPN
MSDDPFMYHIIVFVLVYMLPLVVMGITYTIVGVTLWGGEIPGDTSDNYHGQLRAKRKVVK
MMIIVVVTFALCWLPYHVFFLVTGLNKRLSKWKYIQQVYLSVLWLAMSSTMYNPIIYCCL
NSRFRAGFKRAFRWCPFIKVSSYDELELRSTRLHPTRQSSMYTLSRMDTTMVVVYDPAEG
GDGGVGSGRKHSLSTRKKSYVTSRHTEIAGCNGGGVKTQNGGPPSAQPEEFC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccacataacggatccaacataacggcaaactacaccaaccagtttgtgcag
ccgccgtggcgcgtcgctctctggtctgtcgcctacagctccgtgctggcggtggcggtg
tttggaaacctcatcgtgatatggatcattctggcgcacaaacgaatgaggacggtgacc
aactacttcctgctaaacttggcgttttcggacgcgtcgatggccgcgttcaacactttg
ataaactttatctacgctgcccacggggagtggtacttcggagaggcttactgcaaattc
cacaacttcttcccggtcacgtctgtgttcgcaagcatctactccatgaccgcgatagct
gtggacaggtacatggccatcatccaccctctgaagcctcgtctgtcagccaaagccacc
acaggagtgatcgtctgtatctggagtctggctgtggtcctggccttccctctctgctac
ttctccacaacccgannagctctgcccaacaggaccgtctgctacgtggcctggcccaac
atgagcgacgaccctttcatgtatcatatcatagtgtttgttctggtatacatgctgcct
ttagtggtgatgggcatcacttacaccatcgttggggttacgctgtggggaggggagatc
ccaggagacacatctgacaactatcatgggcagctccgggctaaaaggaaggtggtgaag
atgatgatcattgtagtggtgacctttgccctctgctggctgccctatcatgtcttcttc
ctcgtgacggggctcaacaagcgtctgagcaagtggaagtacatccagcaggtttacctg
tcagtgctgtggctggcaatgagctccaccatgtacaaccccatcatctactgctgcctc
aacagcaggtttcgagctggcttcaagcgtgcatttcgttggtgcccattcatcaaggtg
tccagctacgacgagctggaactacgctctacacggctgcatccaacacgccagagcagc
atgtacacgctgtcacggatggataccaccatggtggtggtttacgacccggcagagggc
ggcgacggcggcgttggctccggaaggaagcactccctgtctacgaggaagaagagctac
gtcacgtctcgtcacacagagattgctggatgcaacggtggcggtgtgaaaacacaaaac
ggaggcccacccagcgctcaacccgaggagttctgttaa
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