Lates calcarifer (barramundi perch): 108896487
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Entry
108896487 CDS
T04895
Name
(RefSeq) BRISC and BRCA1-A complex member 1 isoform X1
KO
K20776
BRISC and BRCA1-A complex member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108896487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108896487
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896487
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108896487
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
108896487
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108896487
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108896487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
Motif
Other DBs
NCBI-GeneID:
108896487
NCBI-ProteinID:
XP_018551156
UniProt:
A0AAJ7QAW1
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Position
LG17:complement(19513336..19517353)
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AA seq
378 aa
AA seq
DB search
METPEPGPADGEERLVELRPRTRSNPEGAEDRRSSTGSLGGNSNPNMSQPAVGSRVEGEG
EASTSDSPSSSTTTTVSTAAAQTVVPAAAAVAAAGSATVPLSTAAVAAKERPKPTQQQPT
LTTTIPPPAEYQLRVPRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNISQKMIEMF
VRTKHKIDKRHEFALVVVNDDALWLSGFTSDPRELCSCLYDLETNVCESFIDLEDLLNVI
RQKIELPLMENVQTIPPPYVVRTVLIYSRHAGQLQFNPSEAVSKMLQSPYFFFDVVYLHN
GMDEQGDETSWRDNYTSFCNLDSKGMCYRFEVSLSGPAIELHNCMAKLLAHPLQRPFQSH
ASYSLLEGEDPQDIEATV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagacaccagagcctggtccagcagatggagaggaacgtctggtggagctgcgacct
cgaacacgctccaacccagagggtgctgaggaccgtcgcagcagcacgggcagcctggga
ggcaacagtaacccaaacatgtcgcagcctgcagtgggcagccgtgtggagggggagggt
gaggcttcaaccagcgacagtccttcaagttccaccaccacgaccgtctcgacggctgca
gctcagactgtagttcccgctgcagctgcggtggcggctgcaggcagtgccacggtgcct
ctgtctactgcagctgttgcagccaaagagaggccaaagcccacgcagcaacagcccaca
ctgacaaccaccatccctccaccagcagagtaccagctgcgagtcccccgcgtcaactgc
ccagagaaagtgattatctgcttagacctttctgaggagatgtctttgccaaagttagag
tcttttaatgggtctaaaacaaatgccctgaacatatctcagaagatgattgagatgttt
gtcagaactaaacacaagattgacaaacggcatgagtttgccctggttgtagtcaatgat
gatgccctatggctgtcaggtttcacgtctgatcccagggagctatgcagctgtctatat
gatctggagaccaatgtgtgcgagtccttcatagacctggaagatcttctaaatgtaatt
cgccagaagattgagctacctttgatggagaacgttcagaccatcccacctccttatgtg
gtgcggaccgtgctcatctacagccgacatgcgggacagctccagttcaacccctctgag
gctgttagtaaaatgctgcagtcgccttattttttctttgatgtggtctatctacacaat
ggcatggacgagcagggggatgagacaagctggagggacaactatacctctttctgcaac
ttggactcaaagggcatgtgctaccgctttgaggtttccctgagtggacctgctatcgag
ctgcacaactgcatggccaaacttctggctcaccctttgcagagacctttccagagccat
gcatcgtacagcctgctggagggggaagaccctcaggacattgaggcaacagtctaa
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