Lates calcarifer (barramundi perch): 108896516
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Entry
108896516 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 1a
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf00071
Fatty acid degradation
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
lcf04216
Ferroptosis
lcf04920
Adipocytokine signaling pathway
Module
lcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108896516
00071 Fatty acid degradation
108896516
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108896516
09143 Cell growth and death
04216 Ferroptosis
108896516
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108896516
03320 PPAR signaling pathway
108896516
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108896516
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108896516
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108896516
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108896516
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108896516
Exosomal proteins of breast cancer cells
108896516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108896516
NCBI-ProteinID:
XP_018551198
UniProt:
A0AAJ7QAN3
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All DBs
Position
LG5:complement(12782010..12802996)
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AA seq
766 aa
AA seq
DB search
MHSRICHDSIDQSQHVSQTLGQSNAVCDWLSSAPAEQTVDRLLLLLLLLQGSGLSLRIRR
CTQGQCRTAMQAQEVLRQLRIPELDDVRQYVRGLPTNALMGMGAFAAITTYWFATRPRAL
KPPCDLGLQSVEIPGGERARRSVLNDSDKHMTHFYNDARTIYEVFQRGLRVSNNGPCLGS
RKPNQPYEWQSYREVADRAENVGSALLHRGHSHTGDKFVGIFSQNRPEWTISELACYTYS
MVAVPLYDTLGTEAIAYIIDQAAISTVICDVPEKARLILDCVGGKGRTVKTIVLMEAFDS
DLVTRGQESGIEILSLKDFEALGKANHREPVPPKPEDLALICFTSGTTGNPKGAMLTHGN
VISNTAAFIKVTEGSLKPSNKDVLISFLPLAHMFERVVEGVILIHGARIGYFQGDIRLLM
DDLKTLQPTVFPVVPRLLNRMFDKVFGQANTPLKRWLLDFAFRRKEAELKNGVVRKDSMW
DKLIFKKVQASLGGRVRLMITGAAPVSPTILTFLRAALGCQFYEGYGQTECTAGCSMSMP
GDWTAGHVGPPLPCNSIKLVDVAEMNYLSVNGEGEVCVKGPNVFQGYLKDPEKTAEAIDK
DGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIETIYNRSDPVAQIFVHGDS
LQACLVGIVVPDPDFLPIWAKKKGIEGSYSELCNNKDVKKAILEDLLRLGKEAGLKSFEQ
VRDIALHPEMFSVQNGLLTPTLKAKRAELRSRFREQIDELYAKIKM
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcatagccgcatttgtcacgacagtattgaccaatcacagcacgtctctcaaacttta
ggacaaagcaacgccgtctgtgattggctgagctctgcaccagctgaacagactgtagac
cgcctgctgctgctgctgttgcttcttcaaggatcaggtttaagtctccggattcgccgc
tgcacacagggtcagtgcagaacagccatgcaggctcaggaagtcctgagacagctgcgc
attcccgagctggatgacgttcggcagtacgtgcgtgggttgcccaccaacgcgctcatg
ggaatgggtgctttcgctgccatcaccacctactggtttgccacccggccaagagccctc
aaaccgccctgtgacctcggcctgcagtcagtggaaataccaggtggagaacgtgcgaga
agatcagtgctgaacgacagcgacaaacacatgacacacttctacaatgacgcacgcaca
atatatgaggtgttccagcgagggctcagagtatcgaataacggaccttgtctaggatca
agaaaaccgaaccagccgtatgagtggcagtcttacagagaggtggcagaccgagcggag
aatgtcggctctgctctccttcacagaggacactctcacacaggagacaagttcgttggt
attttttcccagaacaggccggagtggaccatttcagagctggcctgttacacatactcc
atggtggcagtcccactgtacgacacactcggcacagaggccatcgcctacattatcgac
caagctgccatctcaacagtgatctgcgatgtgcccgaaaaggctcggctgattctggac
tgtgtcggcgggaaagggcgaacagtgaagaccattgtgctcatggaggcgtttgacagc
gacctggtcacccgcggccaggagagtggcatcgagatcctgagtttgaaggactttgag
gccttgggtaaagccaaccaccgggaaccagtgccccctaaaccagaggaccttgcactt
atctgctttacgtctggaaccacaggaaaccctaaaggtgcaatgctcactcacggaaat
gttatctccaacaccgcagctttcattaaagtgacagagggctcactgaagcccagcaat
aaagatgtgctcatctccttcctccctttggcccatatgtttgagagggtggtggagggc
gtcatcctcatccacggagctcgaatcggctacttccagggagacattcgacttctgatg
gatgatttgaaaacgctgcaaccaacagtcttccctgtggtcccacgtctcctcaaccgc
atgtttgataaggtattcggtcaggccaatacaccgctgaaaagatggctgctcgatttt
gccttcaggaggaaggaggcagagctgaaaaacggcgtggtcagaaaagacagcatgtgg
gacaaactcattttcaaaaaagtccaggcgagtctgggcggtcgcgtgagactcatgatt
acaggagcagcgccggtgtcaccgaccatcctgacgttcctgcgagctgcactgggctgt
cagttttatgaaggctacggtcaaactgaatgtacagctgggtgctccatgtcaatgcct
ggagactggacagcaggtcacgtcggacctcctctgccctgcaactctatcaaactggtg
gatgtggcagaaatgaattacctgtcagtcaatggagagggagaggtgtgtgtcaaagga
ccaaatgtcttccagggatacctgaaagacccagagaaaacagctgaggcaattgacaag
gatggatggctgcacacaggagacattgggaaatggcttcctaatggcactctgaagatt
attgaccgaaagaagcacattttcaaactggcacagggagaatacatcgcccctgagaaa
atagaaaccatctataatcgcagtgatccagtggcccagatatttgttcatggtgacagt
ttacaggcatgcctggtggggattgtggtgcctgatccagactttttacctatttgggcc
aagaaaaaggggattgaaggatcctactctgaactgtgcaataacaaggatgtgaagaaa
gccattctggaggacctcctgaggctgggcaaagaagcaggactcaagtcttttgaacag
gtgagagatatcgcactacatcctgagatgttttctgtccagaacggtctcctgacaccc
accctgaaggctaagagggctgagcttcggagccgcttcagagagcagatcgacgaactt
tacgccaaaattaagatgtaa
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