Lates calcarifer (barramundi perch): 108896531
Help
Entry
108896531 CDS
T04895
Symbol
chrna9a
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-9-I
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108896531 (chrna9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108896531 (chrna9a)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108896531 (chrna9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108896531
NCBI-ProteinID:
XP_018551214
UniProt:
A0AAJ7QAL8
LinkDB
All DBs
Position
LG5:complement(14853988..14859599)
Genome browser
AA seq
550 aa
AA seq
DB search
MRKAALMVWISLLVQVSHGAQGHYARKLLNDLMEDYSNALRPVEDTDRALNVSLQITLSQ
IKDMDERNQVLTTYLWIRQVWHDAYLKWEKEDYDDLEMINIPSDLVWKPDIVLYNKADEE
ESGPPSTNVKLRYNGEIVWDSPAITKSSCVVDVSYFPFDWQQCNLTFGSWTYNGNQVDIS
LAMDSGDLSDFVENVEWECHGMPAVRNVMMYGCCADPYTEITYTLLLKRRSSFYIFNLLL
PCFLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPAESMPYIGKYYIAT
MTMITASTSLTIFIMNIHFCGAEAKPVPHWAKVLIIDYMSKIFFVYEVGENCTTPESEKT
PLYPEEPMSDKACYQDDRFHDGIYHHDSDKYKYSNGHSVHKHHKSQANSTANSRNHHFNN
HNNYASRLERGEAKREPTQRYHHIRRDELDYQAPPNPPNLQHLNGGLKEQLLYPTEKIQV
PACPCCCPCLQHKQVVKNIQYIANCFREQRATCVKAAEWKKVAKVMDRFFMWIFFVMVFL
MSILIIAKAS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggcagcgctgatggtttggattagccttttggtacaagtgtcccacggcgcc
cagggtcattatgcccgcaaacttctgaatgacttgatggaggactactccaatgctctg
agacctgtggaggacactgacagagccctcaatgtgtcgctgcagatcacactgtcacag
atcaaagatatggatgagaggaaccaggttctaaccacgtacctgtggatcaggcaggtc
tggcatgatgcctatcttaagtgggagaaggaggactatgacgacctagagatgatcaac
atccccagcgacctggtttggaagccggacattgtcctctacaacaaagcagatgaggag
gagtcaggtccacccagcaccaacgtaaagctgcgttataatggtgagatcgtctgggac
tctccagccatcacaaagagctcatgtgtggttgacgtgtcttacttcccctttgactgg
cagcagtgcaacctcaccttcgggtcctggacctacaacggcaaccaggtggacatcagt
ttggccatggacagcggagacctgtctgactttgtggagaatgtggagtgggagtgccat
ggcatgcccgcagtcaggaacgtcatgatgtatggctgctgcgccgatccttacaccgaa
atcacctacaccctgctcctgaagcgccgctcctctttctacatcttcaacctgctgctg
ccctgcttcctcatctccttcctcgccccgctgggtttctacctgccagccgactccggg
gagaaggtttcccttggggtcacggtgctgctggcgctcacggtgttccagttgctggtg
gctgagagcatgcctcctgcagagagcatgccctatatagggaaatactatattgccacc
atgactatgatcacagcttccacctctctcaccatcttcatcatgaacattcatttctgt
ggtgctgaggctaagccagtccctcactgggccaaggtgctcatcattgactacatgtct
aaaatcttcttcgtctacgaggtgggggagaactgcaccacaccagagagcgagaagacc
ccgctgtaccccgaggaacccatgagcgataaggcctgctaccaagacgaccggtttcat
gacggcatctaccatcacgacagtgacaagtacaagtacagcaatggccacagcgttcac
aagcatcacaagagccaggccaacagcactgccaacagcaggaatcatcattttaacaac
cataacaactatgcttccagactggagaggggtgaggcaaagcgagaacccacgcagcgc
taccaccatatcaggcgggacgaactggactaccaggcccctcctaatccaccgaacctc
cagcacctcaatggagggctgaaggagcagctcctgtatccaacagagaaaattcaagtc
ccagcctgcccctgctgctgcccctgcctccagcataaacaggtggtgaagaacatccag
tacatcgccaactgcttccgcgagcagagggccacgtgtgtcaaggcagctgagtggaag
aaggtcgccaaggtgatggataggtttttcatgtggatcttctttgtcatggtcttcctc
atgagcatcctcatcatcgccaaggcctcctga
DBGET
integrated database retrieval system
