Lates calcarifer (barramundi perch): 108896536
Help
Entry
108896536 CDS
T04895
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896536
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108896536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Dmrt1
Motif
Other DBs
NCBI-GeneID:
108896536
NCBI-ProteinID:
XP_018551218
UniProt:
A0AAJ7QAP4
LinkDB
All DBs
Position
LG5:complement(12312664..12326573)
Genome browser
AA seq
808 aa
AA seq
DB search
MDPKEAGGSEKEKEKEKEKVIKRRNRPVFLRYLERRKTDTIVADDMAKGDINLGTLVRRS
QSDKTEYSAKLKEKMTPHDLSTPPSPAIDPEEVRLRKMNRRAKVIQELVQTEKDYLTGLE
LCIREVVQPLRNLQVVDIDRLFTNIETVCEVSAALYHRLHEAMADPDPEAVVIGEVFIQA
KAALEDVYKIYCYHHGDANMSLKSYEKEEEIKQHFTTCILALKKIYDQEGKPNLLDMGSL
LIKPVQRIMKYPLLLGELWQATPEDHPDCRPLQEAFTAAKIINVNINEFKRRKDIVMKYK
RLEDEGTLRGKLHKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEVFDREEKLFRGLEKAG
RQLVKNVHCYLQYTQEMVSVAVQSVQDMENIVKDPNKNGTNGSLHNNGSDPYKHFKDNME
RLVLVPLCSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSSSSTTSSSPSLASED
PSAPARRDYEAMNALLVEELQRFNMAAYTILTNCVVSLVALLRELMDKILLRAPSIQQLP
APLSNIAEVQNSIMDDLNNLAFVKDNAQKLMERKVSFERQRDKKTTVLEVQHQTEEQRAW
LLAEYPLSRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHTGGEQGYVY
STFLKQYNPLRDSQRAGQMAKEQQQQQPPAMVDDDFDDLSLFVSGSGSSSLRSFNLNTTD
SSSTLSGLQGEPESLEDLEDALDTEAQQFYAVYAFQARCDQELTLQEYQHVRILQFCDVG
GNKEWWLAEANGQRGYVPANYLGRMSYA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggaggccggcgggagtgagaaggagaaagagaaagagaaggagaaagta
ataaagaggaggaaccggcccgtgttcctgcgttacctggagaggagaaagacggacact
attgtggctgatgacatggccaaaggtgacatcaacctgggcacactggtgaggaggagt
cagtcggacaagacggagtacagcgctaaacttaaagagaaaatgacaccacatgacctg
tccacacccccctctccagccattgacccagaggaggtccgtttgaggaagatgaaccgc
agggcaaaggtcattcaggagctcgtgcagactgaaaaggactacctcacaggcctggag
ctgtgtatcagagaggtggtccagcctctacgaaacctgcaggttgtggatatagatcgg
ctgttcaccaacatagagacagtgtgcgaggtatctgcagcactctatcacagacttcac
gaggccatggctgaccccgatccagaggcagttgtcataggagaagtattcatccaggcg
aaggcagctttagaagatgtttataagatttactgttaccaccacggtgatgccaacatg
tcgctcaaatcctacgagaaagaggaggaaataaagcaacatttcaccacatgcatatta
gcactgaagaaaatctacgaccaagaaggaaaacctaacttgctggacatgggttcactg
ctcatcaaaccagtccaaaggatcatgaagtaccctttgctgcttggggagctgtggcag
gccacacctgaagaccatcctgactgtcggccactgcaggaggcattcacagccgccaag
atcataaatgtgaacatcaatgagttcaagaggcgcaaggatatagttatgaagtacaaa
aggttggaagatgaaggcacactgaggggcaaactacacaaatttaacatacattccatc
cgtaagaaaggtgacaggtttgctggctatctcaagatcctcactggggtcgaaccacag
gtgagagatgaagtatttgacagagaggagaagctgttcaggggtctggagaaggctggg
aggcagctggtcaagaatgttcactgttacctacagtacactcaggagatggtgtctgta
gctgtccagagtgtccaagacatggagaacattgttaaggatccaaacaaaaatggtaca
aatggctcattgcacaataatggaagtgacccctataagcactttaaagacaatatggaa
cgcttggtcctcgtccccctctgctccctgcagggcatgttcacagccccgcagaagctc
atccagaaacgttatgacaaattgctggattactgcagccgcctggagcgctcttcctcc
ttttcatcctcatcctcgtcatccaccacttcttcctctccttcgctggcgtcagaggac
ccgtctgctcctgccagaagggactacgaagctatgaatgccttgctggtggaggagttg
cagaggttcaacatggccgcctatactatcctgaccaactgtgtggtgtctctagttgcc
ctgctcagagagctaatggataaaatactgctccgtgctccatccatacagcagctacca
gctccactgtcaaacattgctgaagtgcagaacagcatcatggatgatctgaacaacctg
gcttttgttaaagataacgcacagaaactaatggagcgcaaagtcagctttgagagacaa
cgagacaagaaaacaactgtgctggaggtgcagcatcaaaccgaggaacagcgtgcctgg
ctgctggcagaatacccgctgagccgtctgtaccagctgaagaggaagtgtaatggctgc
caggagcaggacctcagcctgctggagggagagctggtggccctgctagaggacacagac
ccattaggcagcagcagccgctggctggttcacactggaggtgaacaaggctacgtctat
tccacattcctgaagcagtacaaccctctgagggactcgcagcgggcaggccagatggct
aaagagcagcaacagcagcagccacctgccatggtggacgatgactttgacgacctcagc
ctgttcgtgtcaggcagtggcagcagcagcctgcgcagtttcaacctcaacaccaccgac
agcagctcaaccctctctggtctacagggggagccggagagcctggaagacctggaggac
gcgctggacaccgaggctcagcagttttatgctgtgtatgcatttcaagcccgctgtgac
caggagctgaccttgcaggagtaccagcatgttcgaatcctgcagttctgcgatgtggga
ggcaataaggaatggtggttagctgaggctaatggacagagggggtatgtccctgccaac
taccttggcaggatgtcctatgcctaa
DBGET
integrated database retrieval system
