Lates calcarifer (barramundi perch): 108896554
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Entry
108896554 CDS
T04895
Name
(RefSeq) RNA-binding protein 47 isoform X1
KO
K25083
RNA-binding protein 47
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108896554
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
RRM domain-containing proteins
108896554
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GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_fung
ERp29
Motif
Other DBs
NCBI-GeneID:
108896554
NCBI-ProteinID:
XP_018551244
UniProt:
A0A4W6BYM7
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Position
LG5:complement(14499432..14530802)
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AA seq
617 aa
AA seq
DB search
MTAEDPASSSTMSNNAAPSKPSKPSSGASHHSLHGQINIPEGVAGAPNEAALVALMERTG
YSMVQENGQRKYGPPPGWNGPSPPRGCEIFVGKIPRDVYEDELVPVFESVGRIYEMRLMM
DFDGKNRGYAFVMYTEKHEAKRAVRELNNYEVRPGRLLGVCSSVDNCRLFIGGIPKTKKR
EEILEEVSKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGH
QIAVDWAEPEIDVDEDVMETVKILYVRNLMMETSEETIRQVFSQWNPGCVERVKKIRDYA
FVHFTSREDAVLAMDHLNGTEVEGSCIEVTLAKPVDKEQYSRQKASKGGVSATPEATQQN
YVYQCDPYTLAYYGYPYNTLIGPNRDYFVKGSPMIQNNAGTVRGRGRAATGNRTPGPRGS
YLGGYSAGRGIYSRYHEGKTKQPEKPYELMPSLELAASVNPVGIKPGTIALPTLGGQYPV
FSAAPAAKLMEEGKVHTVEHLINPLAMQHPEHTTATAAAAATVLPAVSTPPPFQGRPITP
VYAMAHNVQRIPAASGLYGAGYVPITNYAANTAALAALQKNAAVAAAAYGGYTGYAVPQA
FPATAFQLPIHDVYQTY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaagatcctgcttcctcctcgaccatgagcaataacgctgccccctccaaa
ccctccaaaccctcctctggtgcctcccaccactctctccatggacagatcaacatccct
gagggtgttgcgggtgctcccaacgaggctgcactggtggccctgatggagcgcactggc
tacagtatggtccaggaaaacggtcagcgtaaatatggtccacctcctggctggaacggt
ccatctcctccacggggatgtgaaatctttgtgggcaaaatcccacgggacgtttatgag
gatgagctggtccctgtgtttgagtccgtaggacgcatctatgagatgcggctgatgatg
gactttgacgggaagaaccgagggtacgcatttgtgatgtacacagagaaacatgaggcc
aaacgtgccgtgcgggagctcaacaactatgaggtgcggcctgggcggctactgggggtc
tgctcctcagtggacaactgccgtcttttcataggcggcattcccaagaccaaaaagcgt
gaggagattctggaggaggtgtctaaggtgacagaaggtgtactagacgtgatagtttat
gccagcgctgcagataagatgaagaaccgtggctttgcctttgtagagtatgagtcacat
cgtgcggccgccatggctcgcaggaagctgatgcctggacgcattcagctgtggggtcac
cagatcgcagtggactgggccgagccagagattgatgtggacgaagacgtgatggagaca
gtgaagatcctctacgtcaggaatctgatgatggagaccagcgaagagacgattagacag
gtgttcagccagtggaaccctggatgtgtcgaacgagtgaagaaaatccgtgactatgcc
tttgtccactttacctcccgggaggacgctgtcctggccatggaccacctcaacggcaca
gaggtggaagggtcctgcattgaggtgaccctcgccaagccagtcgataaggagcagtac
tcacgtcagaaggcctcaaaggggggagtttccgccactccagaggcaactcagcagaac
tacgtgtaccagtgtgatccatacacacttgcttactacggttatccctacaacaccctc
atcggacccaacagggactacttcgtcaaaggatccccaatgatacagaacaatgcaggt
actgtgcgaggtcgtggtcgtgctgctacaggtaaccgtacccctgggccgcgggggtca
tacctggggggttactctgccggtcgtggcatctacagccgctaccatgagggcaagacc
aagcagcccgaaaagccctatgagctgatgcccagtctggagctcgctgcctccgtcaac
ccagttggcatcaaacctggcacaatagcgttgccaactctgggcgggcagtacccagtg
ttcagtgcggctcccgcagccaaactgatggaggaggggaaggtgcacacggtggagcac
cttatcaaccctctggccatgcaacaccctgaacacaccaccgccactgctgctgctgct
gccaccgtcctacctgcagtctctacccctccacctttccagggtcgtccaatcactccc
gtctatgccatggcccacaacgtccagcgtatcccagcagcaagcggcctgtacggagct
ggatacgtccccatcacaaactacgccgccaacacggcagctctggccgctctgcagaag
aatgcggcggtggcggccgcggcatacggaggttacactggctacgccgtgccgcaggcc
ttccctgccacagccttccagctgcccatccacgatgtctaccagacatactga
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