Lates calcarifer (barramundi perch): 108896571
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Entry
108896571 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 5
KO
K10492
zinc finger and BTB domain-containing protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896571
04121 Ubiquitin system [BR:
lcf04121
]
108896571
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108896571
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108896571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB_SANBR
BTB_BTBDG
zf-C2H2_15
Zf-C2H2_ZNF451_2nd
Motif
Other DBs
NCBI-GeneID:
108896571
NCBI-ProteinID:
XP_018551276
UniProt:
A0AAJ7QB21
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Position
LG5:complement(15334626..15341772)
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AA seq
761 aa
AA seq
DB search
MEVKHSATLAMDFPGHFEQIFQQLNYQRVHGQLCDCVIVVGSRHFKAHRSVLAACSTHFR
ALFTVAEGDASMNMIQLDSEVVTAEAFAALVDMMYTSTLMLGESNVMDILLAASHLHLNN
VVKACKHYLTTRTLPMSPSSDRSTHHHPQQDQQRRRQQQQQQQQQQQQQQVADLAVNPTL
AANANLAANAATSKLQRSFLLQQLGLSLVSSALGGMEEDGVGNVVGSRGVEQRASFPIRR
FHKRKPSLALGLSEERPRQRQRPSAPNLGLLGEEGVNAEREEGALLSPDSHKMGDESKLD
AAITGLVGISQDDPQMPSQSDSGHCEGEDLGRMQGGVSKEEDMDDQDXQDNRSGVKIKSG
AEEEAEEQEQKVVVKREPLSSPEPTDEISDVTSQAEGSDPAEPGGQEEEEKVELSPESSD
RSFTSEPQPSSDSLLQPGSQLLLKSSMGGGSGVGGGFGCNNGLNGKPGFSISSFLSPKDF
GSGGAGLVTGEDDLPNTTTGEAVAHHFLMRQEAAGPSGSASSSSLLQSGPLSGESRSGFG
DNLQPDSLFLRPLHDSLGNPRGSGGSANGGRGGVDPFALDFQRSSLGLHSLGRPSRGAGG
ATTASLSYPGYRRIAPKMSSSMGGEEGVGGVLQDSASSSSSLASPILLNESGGYEMNSGR
PTSLPPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICCKTFLTLTDCKKHIRVHT
GEKPYACLKCGKRFSQSSHLYKHSKTTCLRWQNSNMSNALL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagcacagcgccaccctggccatggatttcccaggccacttcgagcagatc
ttccagcagctaaactatcagcgtgttcacggtcagctgtgcgattgtgtcatcgtggtg
ggcagccgacactttaaggcccaccgctcagtgctggcagcctgcagcactcacttcagg
gccttgttcactgtcgcagagggagatgcaagcatgaacatgatccagctggacagtgag
gttgtgacggctgaagcttttgctgctcttgtggacatgatgtacacatcaacactgatg
ctgggggagagcaacgtcatggatatcctccttgcagcctcacacctgcacctcaacaat
gtagtcaaagcctgcaaacactacctgaccacacgcacactgcctatgtctccctcatcc
gacagatcaacccatcaccaccctcagcaggaccagcagaggcgcaggcagcagcagcag
cagcagcaacagcagcagcagcagcagcaagtagcagatttagcagtgaatcctactcta
gcggctaatgctaaccttgcggcaaatgctgccacgtcaaagttgcagcgctccttcctg
ttgcagcagctggggctcagcttggtgagctctgccttgggtgggatggaggaggacggg
gtgggaaacgtagttggcagcagaggggtggaacagagagcctccttccctatcagacgc
ttccacaaacgcaagccctctcttgcgctgggcctgtcagaagagagacccaggcagagg
cagcgcccgtcagcccctaacctggggctgttaggagaggaaggggtgaacgcagaacga
gaggaaggagcacttctctccccagactcccacaagatgggggacgaatcgaaattggat
gctgcaatcacaggcctagtggggatttcccaagatgatccccagatgcctagtcagtca
gacagtggacactgtgagggtgaggacttggggagaatgcagggaggggtgagcaaggag
gaggacatggatgaccaggacnaccaggacaacagatcaggcgtgaaaattaaatcaggg
gcagaggaggaggctgaggagcaggagcagaaggtggtggttaagcgagagccgctgagc
tcgcctgaaccgacggatgaaatcagcgacgtgacatcacaggctgagggcagcgacccg
gccgagcctggaggccaggaagaggaggagaaggtggagctgagcccggagagcagcgac
cgcagcttcacctctgaaccccagcccagctctgactctctgctgcagcccggctcccag
ctcctcctcaagagcagcatgggaggaggctccggagtcgggggaggttttggatgtaac
aacggattaaatggcaaacctgggttcagtatttctagcttcctcagcccgaaggatttt
ggaagtggcggagcagggttggttacaggagaggacgacttgcccaacacgacaactggg
gaggcagtagcgcatcacttcctaatgagacaggaagccgctgggccgtctggctccgct
tcttcttcttctcttctgcagtcaggtccactcagcggtgagagtcgcagcggtttcgga
gataacttgcagcctgattctctgttccttcgtcccctgcatgacagtttggggaacccc
agagggagtgggggaagtgcgaatggaggacgcggaggggtagatccctttgctttggac
ttccagcgctcaagtctggggcttcactctctggggcgaccctcacgaggggctggaggg
gcaaccactgcctctctcagttatccaggctacaggcgcatcgctccgaaaatgagcagc
agtatgggaggagaagaaggagtaggcggggtccttcaggattctgcatcttcctcctca
agtctggcaagtcccattcttctcaacgagagcggtgggtatgagatgaacagcggccgg
cccacctccctcccccctcagctgacccgagcttcagcagacgtcctgtctaagtgcaag
aaggctctgtcggagcacaatgtcttggtggtcgagggggctcggaaatacgcctgcaag
atctgctgcaaaaccttcctcaccctgaccgactgcaagaaacacatccgcgtccacact
ggagagaaaccctatgcctgtctcaagtgtggaaagcgctttagtcaatcctcccaccta
tacaagcattccaagaccacctgtctccgctggcagaacagtaacatgtccaatgccctg
ctgtag
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