Lates calcarifer (barramundi perch): 108896594
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Entry
108896594 CDS
T04895
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108896594
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_EndoS
LRRNT
DUF4750
HemY_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
108896594
NCBI-ProteinID:
XP_018551322
UniProt:
A0AAJ7QAT6
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Position
LG5:13622411..13626800
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AA seq
523 aa
AA seq
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MDFLLIGLYLKWPLKKPPGLILCSLGIFLRTVPLVEGVCPRLCRCDSKLLYCEGLNLTDI
PRNLSSAMGLSMRENNLTELREGQLAGLSQLTWLYLDHNNIDIVEEGAFDRLRRVKELDL
SSNRIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVPVRI
FQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYM
HNNRATIVVNTLDWTWHFLEKIDLSANEIEYIEPHVFESAPNLKVLMLDSNRLTSVDQRI
LDSWSSLDSITLAGNDWECSRNVCALASWLSAFRGQRDNSLLCSSPDTAQGEDVLDAVYA
FQLCEDPPMEVTTAGLYASTRDLAQGGSVFLGPFTLNPYEGEGSEVVTSSFTVTVGHDDL
ESTMQIHKVVTGTMALIFSFLIIVLMLYVAWKCFPAGIRQLRQCFSSQRRKQKQKQSMQQ
MAAISTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttctaattggactgtacttaaagtggccactgaagaagccccctgggttg
atactgtgttcactgggcatttttctaagaacggttcccttggtagagggggtttgtcca
aggctgtgccgctgcgacagcaagctgctgtactgcgaggggctcaaccttacagacatt
ccacgcaatctgagcagtgccatgggcctgtccatgagagagaacaacttgaccgagctg
cgtgaaggccaactggctggtttgtcacagctcacctggctctacttagatcacaacaac
attgacattgtagaggagggcgcatttgacaggctaagacgagtcaaggagttagacctg
agcagcaaccggattgagagtctgccaaatggtacgtttaggcccctcccaaacctgcgc
atcctggacctctcatacaacaggctgcaggcactagagcccgacctgttccacggcctt
agaaagctcaccaatttgcatttgcgctacaatgctctcaaatttgtgccagtgcggatt
tttcaagactgccggagcatgcagtttctggacttgggatacaaccaactgcagagcctg
gctcgaaactccttcgctggcctcttcaagttgactgagttgcatcttgagcacaatgag
ctggttaaagtcaacctagcccacttccctcgcctcatctctttacgtactctgtacatg
cacaacaatcgtgccactattgttgtcaataccctggactggacatggcattttttagaa
aagattgacctgtcagctaatgagatcgagtacattgagccacatgttttcgagagtgca
cccaacctcaaggtgctaatgctagactccaatcgtttgacctctgtggaccagcgcatc
ctggattcatggtcatctctggacagcattaccctggcagggaatgactgggagtgcagt
cgcaacgtgtgtgccttggcctcttggctgagtgccttcagaggccagcgtgacaattcc
ctgctgtgttcaagccccgacactgcacagggcgaggatgtgttggatgctgtctatgct
tttcagctatgtgaggatcccccaatggaggtaaccacagcaggcctgtacgcctctaca
agggatctggcccagggtggctctgtgttcctgggcccatttactctcaacccttacgag
ggtgagggcagtgaggtggtcaccagctctttcactgtcacagtgggccatgacgacctg
gagagcaccatgcagattcacaaggtggtgactggcaccatggcactcatcttttccttt
ctcatcattgtgctcatgctgtatgtggcatggaagtgctttccagccggaataagacaa
ctaaggcagtgcttcagcagtcagcgccgtaagcagaagcaaaaacaaagcatgcagcag
atggctgcaatttctactccggagtactatgttgactataaacctaaccacatcgaggga
gctctggtaatcatcaatgaatatggctcttgcacttgccaacagcaaccttctcgggaa
tgtgaggtgtga
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