Lates calcarifer (barramundi perch): 108896655
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Entry
108896655 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108896655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108896655
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108896655
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
108896655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
108896655
NCBI-ProteinID:
XP_018551393
UniProt:
A0A4W6E7D5
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Position
LG4:complement(21138192..21154240)
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AA seq
898 aa
AA seq
DB search
MDTAEEADICRVCRSEGTQDKPLYHPCVCTGSIKFIHQECLLQWLKHSRKEYCELCKHRF
AFTPIYSPDMPSRLPVQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTQNLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQN
QPPLVPNQPNGPAPANEVPGGNAAANAQAAADAAAAQHPADPAADGLAPANPHEAGNQGD
GAELDDDEDDDGEEDEEEEEDEEAREEDAADANNGGQEDLNWNALEWDRAAEELTWERML
GLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSVVGLGFEDYIKASHFDGLITTIL
GYILLAGALMVCHALASLVKFQRSRRLLGVCYIVVKVSLLVVMEIGLFPLICGWWLDICS
LEMFDATLKDREQSFDSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLN
DPDFNPVQEMIHLPIYRHLRRFILSVVVFGSIVLLMLWLPIRIIKLLFPTFLPYNVMLYS
DAPVSELSLELLLLQVVLPALLEQGHTRQWLKRLVHAWTFTAGYMLDLHSYLLGDHEDED
NQPNNNPPGRHNNNRIPGLGEGLHAAHQAILQQGGPVGFQPYHRPINFPLKIILLVVFMC
VTLLLASLLCLTVPVCVGRWLMSFWMGSAMVHELYTAASGLYVCWLSIRAATVMLSWMPQ
GRTVIMLKVHEWTLMILKTIVVAVLLAGAIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQ
DWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLYFILRRLAAPVICVLLLSL
SVPYTISKGITPLLGVQPEMQTLVERRIYPFLLMVVILLAILSFQIRQFKRIIRTHQK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgctgaggaagcggacatctgccgggtctgtcgatcagaggggacccaggac
aagccgctctaccacccctgtgtctgcactggcagcatcaagtttatccatcaggaatgc
ctactgcagtggttgaaacatagcagaaaagaatactgtgaattatgcaaacatagattt
gcatttacaccaatctactctccagacatgccatctcgcttgcctgtccaggatatcttt
gcagggctggtcaccagtattggaacagccatcagatactggttccactacacactggtg
gcctttgcctggctaggcgtggtgcctctcacagcatgtcgtatctacaagtgtttattt
accggctctgtgagctctctccttaccctgccattagatatgctttcaacacaaaacctg
cttgctgattgtctccagggttgttttgtggtcacttgcacgctgtgtgccttcatcagc
ctggtgtggctcagagagcagattgtccatggtggtgcccctcagtggttagagcagaat
caacctcctttagttcccaaccagccaaatggcccggcaccagcaaatgaggttcctggt
ggtaacgctgcagccaatgcccaggctgctgccgacgccgcagcagcccagcaccccgca
gaccctgctgcagacgggctggctcctgccaacccgcatgaagctggcaaccagggagat
ggggctgaacttgatgatgatgaagatgatgatggggaggaagacgaagaggaggaagag
gatgaggaagccagggaagaggatgctgctgatgccaataatggaggacaagaagatttg
aactggaatgctttggagtgggaccgtgcagcagaggagctgacctgggaaaggatgctg
gggctggatggttccctagttttcttggagcatgtgttctgggtggtgtctctcaacaca
ctcttcatccttgtctttgctttttgtccgtatcacattggccatttctcagtggttgga
ctgggctttgaagactatatcaaagcttcacactttgatggcctcatcacgaccatacta
gggtatatcctcctggctggagctctcatggtctgccatgcattggcttcattagtaaag
ttccagaggtccagacgcctcctgggtgtctgctacattgttgtcaaggtgtccctgctg
gttgtcatggagataggcttgttcccactgatttgtggttggtggcttgacatttgctcg
ctggaaatgtttgatgccactctgaaagacagggagcagagttttgactctgctcctggt
accaccatgttcctccactggctggttggcatggtctacgtcttctactttgcctctttc
atccttctgcttagagaggtgctccggccaggtgtgctgtggttcctgaggaacctgaat
gatccagacttcaacccagtccaagagatgatccacctgcctatctacagacatctccgg
aggtttatcctctctgtggtggtgtttggttccatagtattgctgatgctttggcttcct
attagaattattaaactgctcttcccaaccttccttccctacaacgtcatgctttacagt
gatgccccagtgagcgagctgtcattggagctattgttacttcaggttgttcttccagcg
ttgttggagcagggtcacactcgccagtggctcaaacggcttgtccacgcttggacattc
acagctggatacatgcttgaccttcattcatacttgctcggggaccacgaagacgaggac
aaccaaccaaacaacaatcctcctggtcgccataacaacaatcggatccctggcctgggg
gaggggctacacgctgcccatcaggctattctgcagcagggtggtcctgtgggtttccag
ccataccaccggcctatcaactttcccctcaagattatcctgttggttgtcttcatgtgt
gtgacgctgttactggctagtctactctgcctaacagtgccagtgtgtgtgggccgctgg
ctgatgtctttctggatgggtagtgccatggttcatgagctatacacagcagccagtggt
ctgtacgtctgctggctgtctattcgggctgccacagtgatgctgtcctggatgcctcag
ggacggactgtcatcatgctcaaagtccacgagtggacactcatgatcctaaagaccatt
gtggtggctgtgctgttagccggggcaatacctttgctgttgggcctgttgtttgagctg
gtcattgtcgctcctctcagagtcccactggaccagacaccactcttctatccctggcag
gactgggcgcttggcgtgctccatgctaaaatcattgctgccatcacactgatgggccct
cagtggtggctcaaaactgtcatcgagcaggtatatgcaaatggtatcagaaacatcgac
ctctatttcatcttacgaaggctggctgctccagtcatctgcgtcctgcttctgtctctc
tctgtgccctacaccatttctaaaggcattacaccactgcttggtgtgcagccagagatg
cagacactggtggagagaaggatctatccattcctgctgatggtggtcatactgttggcc
attctgtccttccagataaggcagttcaagcgcattatacgaacacatcaaaaatga
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