Lates calcarifer (barramundi perch): 108896730
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Entry
108896730 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: chemokine (C-C motif) receptor 12a
KO
K04179
C-C chemokine receptor type 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108896730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108896730
04050 Cytokine receptors [BR:
lcf04050
]
108896730
04090 CD molecules [BR:
lcf04090
]
108896730
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Chemokine
CC Chemokine
108896730
Cytokine receptors [BR:
lcf04050
]
Chemokine receptors
CC Chemokine
108896730
CD molecules [BR:
lcf04090
]
Proteins
108896730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108896730
NCBI-ProteinID:
XP_018551477
UniProt:
A0AAJ7VFN5
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Position
LG4:24769444..24775952
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AA seq
360 aa
AA seq
DB search
MDNDENSFKDFLNLLDDEENTTDPSYVISETVKFCTKTTVNEFGARFIPVFYYVNFLLSY
LGNGLVLFIIYKYEKLNTVTNIFLLNLVLSNILFATSLPFWATYHLSEWIFGKALCKIVS
SAYFIGFYSSILFLTLMTFDRYLAVVHAVAAAKSRKKVYAIISSVVVWCISVVASVKELV
LQNVWESPYSGLMCEESGFPESTMERWRLVSYYQQFLLFFLLPLFMVMYCYISITVRILS
TRMREKCRAIKLIFVIIFTFFACWTPYNIVILLQAIQISSTSEARDECSDSESLDYALYV
TRNIAYLYCCISPVFYTFVGKKFQSHFRRLIAKKIPCLKRHISLSSQSTRTTSQRTAYEY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgatgaaaactcatttaaggacttcttgaacctacttgatgatgaggagaac
acaactgacccgagctatgtaatcagtgaaactgtcaagttctgtacaaagacaactgtc
aatgagtttggtgcaagattcatcccagttttctactatgtcaacttcctcttgagttac
cttggcaacgggcttgtcctcttcatcatctacaagtatgagaagctcaacacagtgaca
aacatcttcctcctgaatttagtcctctccaacattctctttgccaccagtctccctttc
tgggcaacctaccatctgtctgagtggatttttggcaaggctctgtgtaagatagtcagc
agcgcctacttcattggcttctacagctccatcctcttcctcacactcatgacatttgac
cgatacctcgcagtggtgcatgcagtggcagctgctaagagcaggaaaaaggtgtatgca
atcatcagttcagtggtagtttggtgcattagtgttgtggcaagtgtgaaagagctggtt
ctccaaaatgtgtgggagagtccatattctggactgatgtgtgaggagtcaggattccct
gagagcactatggagcgctggcgtctggtcagttattaccaacaattcctgctcttcttc
ctcctccctctgttcatggtgatgtactgctacatcagcatcaccgtccgcatcctgtcc
acccgcatgagagagaagtgccgtgccatcaagcttatatttgtcatcatcttcactttc
tttgcctgctggacaccctacaacatcgtcatcctccttcaagctatacagatctccagc
accagtgaggccagagatgagtgttctgactctgagagcttggactacgccttatatgtg
acccggaacatagcctatctgtattgttgcattagtcctgtgttttatacatttgttgga
aagaagttccagagccacttcagaaggctgatagctaagaagatcccctgtctgaagaga
cacattagcctcagcagccagagcaccagaaccacatcacagagaactgcttatgagtac
tag
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