Lates calcarifer (barramundi perch): 108896745
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Entry
108896745 CDS
T04895
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04136
Autophagy - other
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108896745
04136 Autophagy - other
108896745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896745
04121 Ubiquitin system [BR:
lcf04121
]
108896745
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108896745
Membrane trafficking [BR:
lcf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108896745
Ubiquitin system [BR:
lcf04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
108896745
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108896745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
108896745
NCBI-ProteinID:
XP_018551493
UniProt:
A0A4W6D2N9
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Position
LG4:25491280..25495241
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AA seq
243 aa
AA seq
DB search
MSLCVLEEETFRHCCRLILQQSEQLRDGWSWESVQGSQEGYLRKTALRSAVINSSPVGDQ
VESSSESGPQTSCQSWPDLQQHKKEQSVLVASAGADSIQGDIDDEDDDADEGVCTVSEGS
SQVLQYEYHILYSCSYSTPVLYFRAFTLEGRSLSLQEVWSSVHSNFSFRLQNSPLNTITQ
QEHPLLGQPFFMLHPCRTEEFMRPVLQVAQDHNRPVNYVLTWLSVVGPMVGLDVPLMYTT
SHY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgtgtactggaggaggagacctttcgtcactgctgtcggctcatcctgcag
cagtcagagcagctgagagatggctggagctgggaatctgtccagggttcacaggagggc
tacctaaggaagactgctctcaggtcagctgtcattaattcaagcccagtgggggaccag
gtagaatccagttcagagtcagggccccaaacgtcctgtcagtcctggcctgatctgcag
caacataaaaaggaacagtctgttcttgttgcctcagctggtgctgacagcatccaaggt
gacatagatgatgaagatgatgatgcagatgagggggtctgtacggtgtctgagggtagc
agccaggtgctccagtatgagtatcacatcctgtactcatgcagctacagtactcctgtt
ctctatttcagagccttcactctggaggggaggagcctgtcattacaggaggtgtggagc
tctgttcattcaaacttcagttttcgacttcagaacagtcctctcaatacaatcactcag
caggagcatccactgctgggtcagcctttttttatgctccatccctgtagaacagaggag
ttcatgaggcctgtgctgcaggtggctcaggaccataacaggccagtgaactacgtgttg
acatggctcagcgtggtcggtcccatggtgggtctggatgtccctctgatgtacactacc
tcccactactag
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integrated database retrieval system
