Lates calcarifer (barramundi perch): 108896749
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Entry
108896749 CDS
T04895
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00250
Alanine, aspartate and glutamate metabolism
lcf00410
beta-Alanine metabolism
lcf00430
Taurine and hypotaurine metabolism
lcf00650
Butanoate metabolism
lcf01100
Metabolic pathways
Module
lcf_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108896749
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108896749
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108896749
00430 Taurine and hypotaurine metabolism
108896749
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
108896749
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
108896749
NCBI-ProteinID:
XP_018551506
UniProt:
A0AAJ7QB36
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Position
LG4:25045296..25062368
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AA seq
536 aa
AA seq
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MDFLQLPDKIIDKSAGRDKQQEDSATVKDRRQTPADFSSIYSKDLLPASGGEEMTRGFLQ
ELVNTLLGYICKSSQRTSKVLDFHHPHQLKEGLEGFSLDLSDQPETLEQILVDCRDTLKY
GVSTGHPRFFNQLSSGLDVIGLAGEWLTSTANANMFTYEVSPVFILMEEVLLKKMQSIVG
WSDDEGDGIFCPGGTISNLYSILVARYHFYPEVKTRGMGALPRLALFTSEHSHYSVKKSA
AVLGMGSENVVMVKCDERGKMIPAELESCIVTAEEKGLVPFYVNATAGTTVYGAFDPLNA
IADICHRHTLWMHVDAAWGGGLLMSDRHRKKLQGIERAWSVTWNPHKMMGVPLQCSAILI
KKRGLLQECNELGAKYLFQTDKPYDVSYDTGDKSIQCGRHIDVFKFWLMWKAKGSEGFGS
QVNKCLENAEYLYDQLQRRTDFELVFKNKPEHSNVCFWYIPPSLRGLPPGPDRDTKLHQV
APRIKGRMMEKGSVLIGYQPLGARVNFFRCVFSNPATQQEDIDFLLDEIARLGDDL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttacagctgccagacaaaatcattgataaatcagctggaagggacaaacag
caggaggactcagcaacagttaaagatagaagacagacgcctgctgactttagcagcatc
tacagcaaagacctgctcccagcttcaggtggtgaggagatgaccagggggtttctgcaa
gagctggttaacaccttgttgggttatatctgcaagtcaagtcagaggacctccaaggtc
ctggacttccaccatcctcaccagctgaaggagggactggagggcttcagtctcgacctg
tcagaccaaccagaaactctggagcagatacttgtggactgtagagacacactcaagtat
ggtgtcagtacaggccatccccgtttcttcaaccagctatcttcaggtctggatgtgatt
ggtttagctggcgagtggctgacctctacagccaacgctaacatgtttacatatgaggtg
tctcctgttttcatcctcatggaagaggttctgctgaagaagatgcaaagcattgtggga
tggtctgatgatgagggagatggaatcttctgtccaggaggcacaatatctaacctgtac
agcatcctggtggccagatatcacttctacccagaagtgaagaccagagggatgggagct
ctccctcgactggccctcttcacttcagagcatagtcactattcagtaaagaaatctgca
gccgtgttggggatgggcagtgagaatgtggtcatggtgaaatgtgatgaaagagggaaa
atgattcctgctgaacttgagtcttgcattgttacagctgaagaaaagggtttggttcca
ttctatgtgaatgcgacagcagggaccactgtgtacggcgcctttgatcctctcaatgcc
attgcagacatctgccatagacacacactgtggatgcatgttgatgcagcatggggcgga
ggcctgctgatgtcagacagacacagaaagaaactgcagggcattgaacgagcctggtct
gtgacatggaatcctcacaagatgatgggtgtccctctgcagtgctctgccattctgatt
aagaagagaggtctcttacaggagtgtaatgagttgggggctaagtaccttttccagaca
gacaaaccctatgatgtgagctatgatactggtgataagagtatccagtgtggccgacac
atcgatgtcttcaaattctggctcatgtggaaggcaaagggctcagagggctttggatct
caggtcaacaagtgcttagagaatgctgagtatctgtacgatcagctgcagagaaggaca
gactttgaactggtctttaaaaacaaaccagagcacagcaatgtgtgtttctggtacatc
cctcctagtctaagaggcctgccacctggacctgacagagatacaaaactccatcaggtg
gctcctcgaatcaaaggcaggatgatggagaagggctctgttctgattggctatcagcct
ttgggagccagagtcaatttcttcaggtgtgtgttctccaatcctgctacacaacaagag
gacattgacttcctgctggacgagattgctcggctgggtgatgacctatga
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