Lates calcarifer (barramundi perch): 108896790
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Entry
108896790 CDS
T04895
Symbol
arpc5b
Name
(RefSeq) actin-related protein 2/3 complex subunit 5b
KO
K05754
actin related protein 2/3 complex, subunit 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04517
IgSF CAM signaling
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108896790 (arpc5b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108896790 (arpc5b)
09144 Cellular community - eukaryotes
04530 Tight junction
108896790 (arpc5b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108896790 (arpc5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108896790 (arpc5b)
05100 Bacterial invasion of epithelial cells
108896790 (arpc5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896790 (arpc5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108896790 (arpc5b)
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Arp2/3 complex
108896790 (arpc5b)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108896790 (arpc5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P16-Arc
Utp12
Glyoxalase_4
crAss001_48
Motif
Other DBs
NCBI-GeneID:
108896790
NCBI-ProteinID:
XP_018551551
UniProt:
A0AAJ7QB33
LinkDB
All DBs
Position
LG17:20003095..20007605
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AA seq
150 aa
AA seq
DB search
MSKSTVSARFRRVDVDEYDENKFVDEEDGGENQLGPDEAEVDSLIRQGNLMEALHAVLKN
PPINTKNQNVKERAEGLVLKVLSAFKSSDIEKAVQSLDKNGVDLLMKYIYKGFERPSENS
SAVLLQWHEKALAAGGVGSIVRVLTARKTV
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagcaccgtgtccgcccgcttcaggcgagtggacgtggacgagtacgacgag
aacaaatttgtggacgaggaggacgggggagaaaaccagctgggtcccgacgaggcagag
gtggactctctcatcagacaaggaaatctcatggaggctttacatgctgttctgaagaac
ccaccaatcaacactaagaaccagaacgtcaaggaacgtgctgagggtttggtgctaaaa
gtgctcagtgcctttaagagcagtgacattgagaaagccgtgcagtctctcgataagaat
ggcgtggacctgctgatgaaatacatatacaaaggcttcgagaggccgtcagaaaacagc
agtgcggtcctactgcagtggcacgaaaaggctctggcagctggaggagtgggcagcatc
gtcagggtactaacagccaggaagacggtctaa
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