Lates calcarifer (barramundi perch): 108896799
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Entry
108896799 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108896799
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108896799
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
108896799
NCBI-ProteinID:
XP_050927919
UniProt:
A0AAJ8B7M0
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Position
LG7_1:15121640..15129569
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AA seq
633 aa
AA seq
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MAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNPLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGSMYLYNVE
NTCGTTAPHYQLLKQGENYAVHTCKSKSARNPLLRWTVGEGALNEFAFSPDGKFLACASQ
DGFLRVFGFDAAELHGTMKSYFGGLLCVCWSPDGRYIVAGGEDDLVTVWSFSDCRVIARG
HGHKSWVSVVAFDHCTTSVEDGDPPAEFSGSDEDFHEQIHFGAGRDRANSAHSRLSKRNS
TDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMSATSPPATGQTTT
TVSTTTNPSGTNGKDNVSNSSSSGNPANSLPGTLPRSNSLPHSSNPAGGSTPNSHTGSSS
NSSNTTTTTTTTXTTTTTKGNSIIDSAFIATGVSKFATLSLHDSRKERHEKDHKRNHSMG
HISSKSSDKLNQLSSSRTAKADAAKTLGTTLCPRMDEVPLLEPLVCKKIAHERLTVLIFL
EDCLVTACQEGFVCTWARPGKVVSDRPLADTVM
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggagggaaggagatgaacgaaattaaaactcaattcaccacacga
gaaggcgtctacaaactcctcactcactccgaatacagccgcccgaacagggtgcctttc
aactcgcagggctccaatcctgttaaggtctccttcgtcaatgtaaacgaccagtccggc
aacggcgacaggatctgtttcaatgtgggccgggaactgtacttttatatctacaaaggc
gtgagaaaggctgctgatcttagtaagcccatagacaagaggatatacaaaggaacgcag
cccacgtgtcatgatttcaacccactcacagctacagcagagagcgtttccctgctggta
ggcttctcagcaggccaggtgcagctcatagacccaataaagaaggaaaccagcaaactc
ttcaatgaagagagacttatagacaagtcaagagtaacgtgtgtacgatgggtccctggt
tcagagagcctgttcctggtggctcactccagtggcagcatgtacctgtacaacgtggaa
aacacctgtggcaccacggcacctcactaccagctccttaagcagggtgaaaactacgcg
gtgcatacctgcaagagcaagtctgctcgtaacccgttactacgctggacagtgggtgaa
ggggcgctcaatgagtttgccttctccccggatggcaagtttctggcttgtgcgagccag
gacggcttcctgcgggtatttggtttcgacgcggcagagctccacggaacaatgaaaagc
tactttggtggcttactgtgtgtgtgctggagcccagatggacgatatattgttgctgga
ggggaggacgacctggtgacggtgtggtcattttcagactgcagagtgatcgcacggggg
cacggtcacaagtcatgggtgagtgtggtggcatttgaccactgtacaaccagtgtggag
gatggtgacccccctgctgagttcagtggtagtgatgaggacttccatgagcagattcac
tttggtgcaggccgggacagagcaaatagtgctcattctcgcctttctaagagaaactct
acagacagtaggcctgttagtgtgacctacagatttggctcagtgggccaggatacccag
ctctgtctgtgggaccttacggaggacattctctttcctcacctcccactgtcccgcact
aggactcacactaatgttatgagtgccacaagccccccagccactggacaaactactact
actgtatccaccaccactaatcccagtggcaccaatggtaaagacaatgtgagcaatagt
agctccagtggtaacccagctaactccctccctggcaccctgcctcggtccaatagcttg
ccacactcatccaacccagcagggggcagcacccccaacagtcacacaggcagtagcagc
aacagcagcaacaccaccaccaccaccaccaccaccnacaccacaaccacgaccaagggc
aacagcatcattgacagtgctttcattgccaccggagtcagcaagtttgcaacgctgtcg
ttacacgactcgcgcaaggagcgccacgagaaggaccacaaacgaaaccacagcatgggt
cacataagcagcaagagcagtgacaagctcaaccagcttagctcatcacggacggcaaaa
gctgacgcagctaagactctgggcaccacgctgtgcccgcgcatggatgaagtgccactg
ctcgagccgctagtgtgcaagaagatcgctcacgagagactcactgtgttaatcttcctt
gaggactgtctggtaacagcctgtcaggagggtttcgtttgcacatgggctaggcctggg
aaagtggtgagtgacaggcctcttgcggatactgtcatgtga
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