Lates calcarifer (barramundi perch): 108896800
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Entry
108896800 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108896800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896800
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108896800
INO80 complex (yeast)
108896800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
108896800
NCBI-ProteinID:
XP_018551557
UniProt:
A0AAJ7QBG5
LinkDB
All DBs
Position
LG7_1:14717277..14751590
Genome browser
AA seq
1506 aa
AA seq
DB search
MAASGQGGRLEVGASASSGLAKPLYLQRLERSLRLDSFLRQTATIFNRDITSDDSDDSDG
TLGTGLSLDHSTQHTALTVKSEPCEHGDGLAEGKPLNGVLLQSKDQKADKTSLYNFSKLK
KNRKWLKSILLSDDTTDSDTDSDDSDFSLSREELHDMLRLHRYTRQHQSKFHSDRELHQY
QYYSTGLLSNHDPFYEQQRHLLGPKKKKIKDEKKFKAKLKKVKKKKKRGEGEFLEEGRPY
VTKIFAKFSHDAPLPMVKKKHLTIEQLNARRRKVWLTIAKKEIPKSFKQKTSAKNLVLTN
AKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMMLYWKKYEKVEKEHRKRAEKEAL
EQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSGKASMGGPGGDTAQEEILRKLEDTAA
QRQIDIGGGVMVNMGQEDYDSDYYKSQALRNAKEAYQIHQERTRMFDEEAKDSRSASLHV
AGGSSSGAGSGFGESYSLSNPSIHAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGING
ILADEMGLGKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYW
GNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKS
STSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIES
HAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALR
NKISIEDLLQSSMGTAQQSHSTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSIKPYI
MSKFLYRHGLIHAHNQAKNKLLQVLLSPFSPNHIQQSLFHRKGDDKGSCFSFLRFIDVSP
AEMSNLMLQGTLVRWLALFLSLKSAYRLHYQRLFGFEEESQEEARDGEGDGGRLQPGIKC
LSRKDLILWLNRPTAFPNMHTSPVLQDLVFTAFRPGIVGHTDVKIHSRNSATSTLRPCQP
TLPPKFLLAAMPRVTAVPMERYCDDRSAEYEWWVTRGGGGAIFKQCFLYGSPDLASEWRV
RANAFHPRCPGGVMALYPRHGWSFIQIPDKESLITESGKLHTLDILLSRLKAQGHRVLIY
SQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGI
NLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICQGTIEERILQRAKEKSE
IQRVVISGGNFKPDTLKPKEVVSLLLDDDELEKKLRQRQEEKRQQEESSKVKERKRKREK
YAEKKKNEESENKRKKDVNLVISHAPSADNSNLSADGDDSFISVEMDSAMPSPFSEISLS
SELQPGSLPPDADADESSSDMLVIVDDPVSSAPQSRATNSPASVSGSVSDNMNGVSASDT
ISPGRGRSGRSRGRPKGSGGGAKSGGKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYG
YSVSKG
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcagggcagggtggccggctggaggttggggcatcggcgagctctggcctg
gccaaacctctctacctgcaacgcttagaaagatccctgaggttggacagtttcctgcgc
cagaccgccaccatcttcaacagagacataaccagtgatgacagtgatgacagcgatggt
acattggggacagggctatccctggaccactccactcaacatacagctttgacagtgaag
agtgaaccatgtgagcatggtgatgggttggcagagggcaagcccctcaacggagttctg
ctgcaaagtaaagaccaaaaggcagataaaacaagcctctacaatttctccaagctgaag
aaaaacaggaaatggctcaagagcatcctgttgagtgacgacactacagactcggacaca
gactccgatgactctgatttcagtttgtcgcgagaggagctgcatgacatgctgaggcta
catcgctacaccaggcagcatcagagcaagttccattctgaccgagagcttcaccaatat
cagtactacagcactggactcctctctaatcatgaccccttctatgagcaacagcgccac
ctgctgggcccaaagaagaagaaaatcaaagatgagaagaaattcaaggccaaattgaaa
aaggtgaagaagaaaaagaagcgtggagagggagagtttctggaagaggggcgtccctac
gtcaccaaaatctttgccaagttttcccatgatgcaccgctgcccatggtgaagaagaaa
cacttgaccattgagcagctgaacgcacggcggcgtaaagtctggctcaccatcgccaaa
aaggagattcctaagtcttttaagcagaagacgtctgctaagaacctggtgttgaccaat
gctaaaaagctggctcatcagtgcatgcgagaagtgcggcgtgcagctatccaggctcag
aagaactgtaaggagacgttgccccgggctcggcgtcttaccaaggagatgatgctttac
tggaagaaatatgagaaggtggagaaggaacacaggaagagggcagagaaggaggccctg
gagcaacgtaaactggacgaggaaatgagagaggccaagcgccagcagcgcaaactgaat
ttcctcatcactcaaacagagctgtatgctcactttatgagtggtaaagccagcatgggg
ggaccaggaggggatacagctcaggaggaaattcttagaaagcttgaagacactgcagct
cagagacagatagacattggaggaggggtcatggtcaacatggggcaggaggactacgat
agtgattactacaagtctcaggctctgaggaatgccaaagaagcctaccagattcatcaa
gagagaacgcgaatgtttgacgaagaggcaaaagacagtcgcagcgcgtctttgcacgta
gctggcggctcgtcctcaggtgccggctctgggttcggagagagctacagcctctccaac
ccatccatccatgccggtgaagacattcctcagcccaccatcttcaatggcaaactcaag
ggttaccaactcaaaggcatgaactggctggcaaacctctatgaacagggaatcaatgga
atcctggcagatgagatgggactggggaaaacagtccagagtattgccctcttggcccac
ctagcagagagagacaacatctggggtccgttcctgatcatctctcccgcttccacgctc
aacaattggcatcaggagttcacccgcttcgtgcccaaattcaaggtgttgccgtactgg
ggaaaccctcacgatcgcaaggtgattcggaaattctggagccagaaaaccctttacacg
caaaatgcaccatttcacgtggtgatcacgagctaccagctggtggtccaggatgtcaaa
tacttccagagggtcaagtggcagtacatggttctggatgaagctcaggcactgaagagc
agcaccagtgttcggtggaaaatcctcctgcagttccagtgtcgaaataggctgctgctc
accgggacgcccatccagaacacaatggctgagctgtgggccctgctgcacttcatcatg
cccaccctgtttgattcccatgaagagtttaacgagtggttctccaaggacatcgagagc
cacgctgaaaacaagtctgccatcgatgagaaccaactttccagattgcacatgatcttg
aagcctttcatgctgcgcaggatcaagaaggatgtggaaaatgagctctcagacaagatt
gagatcctgacctactgccagctgacatcccgccagaggcttctctaccaggctctgagg
aacaagatctctattgaggacctgctgcagtcctccatgggcacggcccagcagtctcac
agcaccacctcctccctcatgaacctggtcatgcagttcaggaaggtgtgtaatcaccct
gacttgtttgagcgccaagagacacgctctcctttccacatgtccatcaagccctacatc
atgtctaagttcctctatcgtcatggcctcatccacgcacacaaccaggccaagaacaaa
ttacttcaagtgctgctgtctcccttttctccaaatcacatccagcagtctctttttcac
agaaaaggtgatgacaaaggaagttgtttctccttcctgcgcttcatcgatgtgtcgcca
gctgagatgtccaacctcatgctgcaaggcactttagtgagatggttagccctttttctg
tccctgaaatctgcgtaccggctccactaccaacgcctgtttggcttcgaagaagaaagc
caagaggaagccagagacggggagggggatggagggaggttacagcctgggattaagtgt
ctgtctcgcaaggacctgatcctgtggctgaacagacccacggccttccccaacatgcac
accagccctgtcctccaggatctggtgttcacagccttcaggcccggcatagtgggacac
acagacgtgaaaatacacagcagaaattctgccacttccacgttgcggccctgccagccc
acgctgcctccaaagttcctgcttgctgccatgcccagggtgacggcagttcccatggag
cgttattgtgatgaccgcagtgctgagtacgagtggtgggtgacacgcggcggagggggc
gcgatcttcaaacagtgcttcctctacggctcccctgacctcgcatcagagtggcgcgtg
agggccaatgccttccacccacgatgccccgggggcgtgatggccctctaccctcgccat
ggatggtccttcattcagatacctgataaggagagtctgatcacagaaagtggcaaactc
cacaccttggacatcctgttgagtcggctaaaggcgcagggacacagagtccttatctac
tcccagatgacgcgcatgatagacctgctggaggagtacatggtttatcgtaagcacacc
tacatgcgccttgatgggtcctccaagatttctgaacgtagagacatggtggctgacttc
cagagtcggacggatatctttgtgtttctgctgagtacgagggccggagggctgggcatt
aacctgactgccgctgacactgttatcttctacgacagcgactggaaccccacggtggac
cagcaggccatggacagggctcacaggctgggtcagaccaagcaggtcaccgtgtatcgc
ctcatctgtcagggcaccatcgaggagaggatcctccagcgggccaaggagaagagcgag
atccaaagggtggtgatctctggaggcaacttcaaaccagacacactcaaacccaaagag
gtggtcagcctcctattggacgacgatgagctggagaagaaattgcggcagagacaggag
gaaaagaggcagcaggaggagagcagcaaggtgaaggagcgcaagaggaagagggagaag
tacgccgagaagaagaagaacgaggagtcggagaacaagaggaaaaaggatgtgaacctg
gtcatctcccatgccccctcagccgacaactccaacctctctgcagatggagacgactcc
ttcatcagcgtggagatggactcagccatgcccagtcccttcagtgagatctccctgagc
agcgagctccagcctggctctttgccgccggacgcagacgcggacgagagcagcagcgac
atgctggtcatcgtggacgatccggtgtcttccgcgccgcagtctcgtgccaccaactcc
ccggcctctgtgtctggatcagtctctgacaacatgaatggtgtttcagcctcagacaca
atcagtccgggcagaggcaggtccgggcggagtcggggacggcctaaaggatcaggaggc
ggggccaagtcgggaggaaaaggacgtgggcgcaagtcgacagcgggcagcgcggcagct
atggcgggagcgatggctggcgcggcagctgcgtcagctgcagcttatgctgcttatggc
tatagtgtctctaaaggttag
DBGET
integrated database retrieval system
