Lates calcarifer (barramundi perch): 108896882
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Entry
108896882 CDS
T04895
Name
(RefSeq) protein SOGA3 isoform X2
KO
K27704
microtubule cross-linking factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896882
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108896882
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOGA
YabA
APG6_N
TSC22
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
108896882
NCBI-ProteinID:
XP_018551682
UniProt:
A0A4W6EN77
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Position
LG7_1:14057683..14065631
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AA seq
889 aa
AA seq
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MKPAAGGAADPPSSSTSSADNNAGRRRQHRAPSPARAQEGATKRAPRHPGRCRSPLAAGR
SRNAGVKESLRSADGREREPESRDGAAVHADGAEADLVRPNRADAVGEEPTDSSTSARRS
ALRLPCLKGDSNQRSSSGRVSSSSSSSSSSFSGKTKEKKPGEQGSHRERGGGSVGCGGAG
LGLGLWRGGCLQAELIHFHLQKRLKRSGARMQTKAVDDAGAEEAARGEMEPAAEATEAGS
VTQQDQAFQDEMERLLEENEDLKCEIEEMRTEMDEMRDTFYEEDTCQLQEMRRELERANK
NCRILQYRLRKAERKRLRYAQTGEIDEELLRSLEQDLKVAKDVSVRLHHELEKVEEKRAK
TEEENEKLRQKLIEVEVTKQALQNELDKTKESQKRRGSKDIQKTDKKAAQTLTEEDNEDL
KCQLAFIKEEAVLMRKKTAKIDKEKDRLEQELQKYRSFYGELDSTHPKGEAGGPPTTRES
ELKLRLRLVEEEANILGRKIVELEVENRGLRAELDDLRGEGEGAGSSGCGAMGGPGAGRG
LGDDLTELRQQLQLVEDEAELLRRNLADAEDQNKRVTAELNKLRFKAGTHEGGARHGGGG
VAGGAGIDGAKVEALQEELKAARLQINDLSGKVMQLQYENRVLLSNMQRYDLASHLSLRP
SPRDSDAESDAGGATSGRRESDEDSNSSRLLPPHRKREGPVGGESDSDEVRNNNGSSHCL
TPTRGLYTPTGPEGAASSALARFLPSGRCSLRDRQQMIDIRMEAERLVRTIDRLIADTAT
IISEARVYVSNGDLMLGRGGEEGGEDDGSRIREHELLYRINAQMKAFRKELQAFIDRLEV
PVLEDRETEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggccgccggcggcgctgcagatcctccatcatcgtcaacatcatcagcggac
aataacgcagggaggaggaggcagcaccgggctccctcgccggcaagagcccaggaaggg
gcaacgaagcgagctccaagacacccgggcaggtgcagatctcctctcgccgcaggaagg
agcagaaacgccggggtgaaggagagcctgaggtccgccgacggaagggagagggagccc
gagagccgcgacggggcagctgttcacgctgatggtgctgaagctgatctagtcagacca
aacagggcggatgctgtcggggaagagccgacagattcgtcaacatcggcccgtcgctcc
gctttgcgcttaccctgcttgaaaggcgactccaaccagcgttcgtcgtccggtagagtc
tcctcttcctcctcctcctcgtcgtcttccttttcggggaaaacgaaagagaagaaaccc
ggagagcagggcagccacagggagagaggaggcgggtccgtgggctgcggaggagcgggc
ctcggtttgggtttgtggagaggaggatgcttgcaggctgaactgatccacttccatctg
cagaagaggctgaagagaagcggcgcgaggatgcaaactaaggcggtggacgacgcgggc
gcagaggaggccgcgaggggagagatggagccggctgcagaggcgacagaggcggggtcc
gtgacacagcaggaccaggcctttcaagacgagatggagagactgctggaggaaaatgaa
gatctcaagtgtgagatcgaagagatgaggaccgagatggacgagatgagggacactttc
tacgaggaggacacttgtcagctgcaggagatgaggcgtgagctggagagggccaataaa
aactgccggatcctgcagtatcgtctgaggaaggcagagaggaagaggctgcgctacgcc
cagacgggagagatcgatgaggagctgcttaggagtctggaacaggacctgaaggtggcg
aaggacgtgtctgtgaggctgcaccacgagctggaaaaagtggaggagaagcgtgcaaag
acagaggaggagaatgaaaaactcagacaaaaactcatagaggtggaagtgaccaaacaa
gctctgcagaatgaactagataaaaccaaagagtctcaaaagagaagaggaagcaaggac
atccagaagacagacaagaaagcagcacagactcttactgaggaggacaatgaggacctt
aagtgccagttagcattcatcaaagaggaggccgtgcttatgagaaagaagacggccaag
attgacaaagagaaagaccgactagagcaggagctgcagaaataccgctccttctatgga
gagctggacagcacccatcctaaaggagaggcaggggggccacccaccacccgagagtca
gagctgaagctgcggctccgcctggtggaggaagaggccaacatcctggggaggaagata
gttgagttggaggttgagaaccgaggcctgagggccgagctcgatgaccttcgtggtgaa
ggcgaaggagctggaagctctgggtgcggagcgatgggcgggccgggtgcagggcggggc
ctgggagacgatctgacggagctccggcagcagctgcagttggtggaggacgaggcagag
cttctaaggaggaacctcgctgatgctgaggatcagaacaagagggtgacggcagagctt
aacaagctacggttcaaagcaggaacccacgagggaggcgccagacatggaggaggagga
gttgcaggaggtgcggggattgatggagcaaaggtggaagctctgcaggaggagctgaag
gcagcgaggctacagatcaacgacctaagtggaaaggtaatgcagctgcagtacgagaat
cgtgtgctcctctccaacatgcagcgttatgacctggcctcccatctctccctgcggccc
agcccacgtgacagtgatgcagagagtgatgccggcggtgcaacgagtggccgacgcgaa
agcgacgaagactccaactcctctcgcctcctcccacctcaccgcaaacgtgagggccca
gtgggcggggaaagtgactcagacgaggtcagaaacaataacggcagcagccattgcctg
acgcccactaggggcctctacacccccaccgggcccgagggtgccgcctcctctgccttg
gcccgcttcctgcccagtggccgatgcagcctgcgtgacaggcagcaaatgattgacatc
cgcatggaagcggagaggctcgttcggaccatcgacaggctcatcgctgacacggccacc
atcatctcagaggcgagggtctacgtttccaatggcgacctgatgcttgggagaggaggg
gaggagggtggagaggatgatgggagcaggatcagggaacatgagctgctgtatcgcatt
aacgcccagatgaaggccttcagaaaagagctgcaggcctttatagacagactggaagtg
ccagtgctggaggacagagagacagaggagccactgtcgatgttccagcccatcattttg
ctcatcctcatcctcgtgttattctcatccctctcttacgccaccatctttaaactagtc
tttctttttactcttttctttgttctgtga
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