Lates calcarifer (barramundi perch): 108896891
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Entry
108896891 CDS
T04895
Name
(RefSeq) transcriptional activator Myb isoform X1
KO
K09420
transcriptional activator Myb
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896891
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108896891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Cmyb_C
LMSTEN
Myb_DNA-bind_7
Myb_DNA-binding_7
SANT_DAMP1_like
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
108896891
NCBI-ProteinID:
XP_018551691
UniProt:
A0A4W6E9Z4
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Position
LG7_1:13121567..13131032
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AA seq
607 aa
AA seq
DB search
MARRPRNSVYSSEEDEEETEMYEHDYDGSLAKTGKRHLGKTRWTREEDEKLKKLVELHGS
EDWKLIASLLTNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAK
HLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNA
IKNHWNSTMRRKVEQEGYLQNTSKSSNSSLSIGHGYVKSAGHIMGFPNHSPNQAQLPPLP
PINYTYISNTHRVPFPMALHLNILNIPQPGTAAIQRHYSEEDPEKEQRVKEIELLLMSTE
NELRGQPSLPINLPYPSWASQSSLTSSSEGVAMSLPHHHAAAPALPLDQSCLPEESASAT
RAHSNTSSNNNNNNNSNSHHSSPAFSNPIPEFMESVIDSFLNQSMSPEHSDNDSLPMNSP
VESKPLIDHSIRPQKENEMFRTPNICRSILESSPRTPTPFRSALAMQEAKYGPLKLLNTP
LEQQMVTSIKQEPMECAIEQPPLKKIKQEVESPCERSPCMQWEAQDLHTQLFSPNGPAQE
VPDLLTSSLLSEEGHKTYHLPRRGMGSPLQQLSSWEQATCGKTEEHILASEQSHKYINTY
PTRTLVM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcggccgagaaacagtgtttacagtagtgaggaagatgaagaggagactgag
atgtatgaacatgattatgatggatcactggccaagacagggaaacgccacctcggcaaa
acacgctggacacgagaagaggatgagaagttgaagaaacttgttgagcttcatggatca
gaagactggaaactcattgcaagcttattaactaatcgtacagatgtgcagtgtcagcac
aggtggcagaaggtgctgaacccagaactcatcaaagggccctggactaaagaagaggac
cagagggtgatcgagctggtccagaagtacggagccaagcgctggtcggtgatcgccaag
cacctgaaggggcggatcggcaagcagtgccgcgagcgctggcacaaccacctgaacccg
gaggtgaagaagacatcgtggaccgaggaggaggaccgaatcatctaccaggcacacgag
aagctgggcaatcgctgggccgaaatcgcaaagctgctccctggcaggactgacaatgct
ataaagaaccactggaactccaccatgaggcggaaggtggaacaggagggctaccttcag
aacacgtcaaagagcagcaactcctcgctctccatcggccacggctacgtcaagagcgcc
ggtcacatcatgggtttccccaaccactcgcccaatcaagcgcagctgcctcccttgcca
ccaatcaactacacctacatctccaacacacacagagtgcccttccccatggccttgcat
ttgaacatcctgaatattcctcagcctggaaccgctgctatacagagacactatagtgag
gaggaccctgagaaggagcagagggtgaaagagatcgaactgctgctcatgtcgacagaa
aatgagctgagaggccagccatcactaccaatcaatttgccctatccaagctgggccagc
cagagctctttgaccagcagttcagagggtgtggccatgtcattacctcatcatcacgca
gccgcccccgccctgcctctcgaccagagctgcctaccagaggagagcgcctccgcaaca
cgtgcccacagcaacaccagcagcaacaataacaacaacaacaacagcaacagtcatcac
agcagcccagcgttctcaaatcctattccagagttcatggaatctgttattgattcattt
ctcaaccagtcaatgagcccagaacactccgacaacgacagtttaccaatgaactcacct
gtggagtccaagcctctgatcgaccactctatcaggcctcagaaagagaatgaaatgttc
agaactccaaacatttgtcgctccatcctggagtcatcgcctcgcacacccacacctttc
aggtcagctctggccatgcaggaagccaagtatgggcccctcaaactactgaataccccc
ctggagcagcagatggtcacgtccatcaaacaggagccaatggagtgtgccattgagcag
cctcctctgaagaagataaaacaagaggtggagtccccatgtgagaggagcccatgtatg
cagtgggaagcacaagaccttcacacacagctcttctcccccaacggccctgcacaggaa
gtacctgacctacttacaagctcactactgagtgaagaaggacacaaaacctaccacctc
cctcgcagaggcatgggcagcccactacagcagctcagttcctgggagcaggcaacctgt
gggaaaacagaggagcacattttggcctcggagcagagccacaagtacatcaacacttac
cctacgaggacactggtcatgtag
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