Lates calcarifer (barramundi perch): 108896901
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Entry
108896901 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase pellino homolog 2
KO
K11964
pellino [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108896901
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108896901
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Pellino proteins
108896901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pellino_FHA
Pellino_RING
DUF7501
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108896901
NCBI-ProteinID:
XP_018551713
UniProt:
A0A4W6DNE6
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Position
LG7_1:15509100..15520394
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AA seq
428 aa
AA seq
DB search
MNSPKKDGDDDVPVKDPVKYGELVILGYNGSLPSGDRGRRKSRFALYRRAKANGVKPSAV
HILNTPQDSKAVHSRGQHSISFTLSRNQTVVVEYCHDNNTDMFQIGRSTESPIDFVVTDT
SGGGKEGEDPSIAPSTISRFACRVVCERNPPYTARIYAAGFDSSKNIFLGEKATKWKNPD
GHMDGLTTNGVLVMHPEGFPEDPKQGLWREISVCGDVYALRETRSGPSRGKLAEGESSAL
RDGSLVDLCGATLLWRTGEGLMRAPTLRHLEALRQELNASRPQCPVGLSTLAFPSLPRSH
SLEERQPWVYLACGHVHGRHDWGQRSEGEEEPGEGEGSTARRECPLCRSVGPYVPLWLGC
EPAVYVDAGAPTHAFVPCGHVCSEKTARYWAETPLPHGTHAFRPVCPFCSTALSSPGWTR
LIFQGPID
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccgaaaaaagacggagatgatgatgtgcccgttaaagacccggtaaaatac
ggcgaattggtcattttggggtacaatggctctcttcctagtggagaccggggccgcaga
aagagccgcttcgctctgtaccgaagggccaaggccaacggtgtcaaacccagcgctgtg
cacatcctcaacacaccacaggacagcaaggctgtacacagcagagggcagcacagcatc
tctttcactctgtcccgtaaccagacagtggtggtggagtactgccatgacaacaacaca
gacatgttccagattggacgctccacagaaagtcccattgacttcgtggtaacagacacc
tccggagggggaaaagaaggggaggacccctccatcgctccaagcacgatctcacgtttt
gcctgtagagtggtgtgtgaacgcaacccaccctacaccgcacgcatttatgctgcaggc
tttgactcctccaaaaatatcttcctaggggaaaaagcaaccaaatggaaaaaccctgat
gggcacatggatggcctgaccaccaatggagtgttagtgatgcatccagaggggtttcca
gaggaccccaagcaggggctatggagggagatctctgtctgtggtgatgtctacgcgctg
cgggagacacgctctggacccagccggggcaaactagcagagggagagagcagtgcacta
cgagacggttccctggtcgacttgtgtggtgccaccctgctgtggcgtacaggcgagggg
ctcatgcgtgctcccaccctgcgccacctggaggcacttcgccaggagcttaatgcatcc
cggccccagtgtcctgtaggcctcagcacgctggccttccccagcctgccacgcagccac
agccttgaagaacgtcagccctgggtctacctcgcttgcggccatgtccatggacgccac
gactggggccagagatctgagggagaggaggaaccaggagagggcgagggctccacggcc
cgccgagaatgtcccctgtgcaggagcgtgggtccctacgtgcccctgtggctgggctgt
gaacctgctgtgtatgtggacgccggtgctcccacgcacgctttcgtgccatgcggtcat
gtctgctcagagaagacagccaggtactgggccgagaccccgctgccccatgggacgcac
gccttcaggcctgtctgccccttctgctccactgccctcagctcccctggctggacgcgg
ctcatcttccagggccctatcgactag
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