Lates calcarifer (barramundi perch): 108896917
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Entry
108896917 CDS
T04895
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108896917
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
108896917
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
PI-PLC-X
CBM53
Motif
Other DBs
NCBI-GeneID:
108896917
NCBI-ProteinID:
XP_018551741
UniProt:
A0A4W6DZ52
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Position
LG7_1:15899822..16159168
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AA seq
674 aa
AA seq
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METTQVTLAVRGETSPGEVIAVVGSCEALGCWSHQKAVTLHPDGNDGNTWTTTITVPKGV
VSKYRYFKGYFLESKSAGGPCQVIVNMWETHHHPRTMCPTALHQNIDDGHFGINNGVNCV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKFKKSRFRIKLTLEGIEEEEDDDEDVPSPSSW
NKITTTLEISMISANGYKSRHSQPECGYALEPSQWTEYSIHTMDPDNLELTFEFFEEDLS
EHVVQGDAHPGHVGTACLLSSSFVESGKDNGVVTLPIMGRNSRQTIGKVRVDYLVIRPIQ
GLQCDMSSSFTKYWKKRSALNVGHRGAGSTHAAKHHRVRENTIASFKSAAKHGAAYVEFD
VHLSKDAVPIVYHDLTCCISTKKKNDKTSLELIEVPVKDLTFDQLQLLKLAHVTAMKEND
NKDLLDDEDEIDEHQPFPSLSQIFHAIPEHVGFNIELKWICQMKDGSWDGNLSSYFNMNT
FLDTVLSCVLQKGGKRRIVFSCFDPDICTMVRHKQNKYPILFLTQGISDRYPELMDIRCQ
TTQIAISFAQSENILGISAHTEELLKNLTFIADAQSKGLVVFSWGDDNNDHENRRTLREQ
GIDGLIYDSICEDQGEQPNIFQVEEQHSLQEVITEETLKSSTCSCYSIPCSMAPCIASKA
RAGSAESDSGLSSS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactcaggtgactctggctgtcagaggagaaacgtccccaggtgaggtgatt
gctgttgttggcagctgtgaagccctgggatgctggagccatcaaaaagctgtgacatta
catcctgatggcaatgatggaaatacatggactacaacaatcactgtaccaaaaggagtt
gtttccaagtaccgctatttcaaaggctactttctggagtcaaagagtgcaggtggcccc
tgtcaagtgatagtcaatatgtgggagacccatcatcacccccgcacgatgtgccccaca
gcattgcaccagaatattgatgatggacattttggaattaacaatggggtgaattgtgtt
gactctgggtggctcacatgccagacagagattcgcctgcgtctgcactattctaagacg
tctccggtgtccatcactaagaagaaattcaagaagtctcgcttcaggatcaagctgaca
ttagagggcattgaagaggaggaagatgatgatgaagatgtgcccagtccttcatcttgg
aacaagatcaccaccaccctggaaatcagtatgatcagtgccaatggctataagtcgcgt
cactcacagccagagtgtgggtacgccctggagccctcccagtggactgagtacagtatc
cacaccatggacccagacaacctagagctcacctttgagttctttgaggaggatctgagt
gagcatgttgttcagggggatgctcatccaggacatgtaggcacagcttgtctcctctcc
tcctcttttgtggagagcggcaaagacaatggagtagtcacgcttcccataatgggtcga
aattccagacagaccattgggaaagttagagtggattacttggtgattcggccaattcag
gggctgcagtgtgacatgagctcctcattcaccaagtattggaagaaaagaagtgctctg
aatgtgggtcacagaggagctggcagcacacatgcagccaagcaccacagagtcagggag
aacacaatagcctcattcaaaagtgctgccaaacatggtgcagcctatgtagagtttgat
gttcacctttccaaggatgctgttcctattgtataccatgatctgacatgctgcatatct
accaagaagaaaaatgacaagacttcgctggagctcattgaggtgccagtcaaagacttg
acatttgatcagctgcagcttctgaagctggcccatgttaccgcaatgaaagaaaacgat
aacaaagatcttctggacgatgaagatgaaattgatgagcatcagccattcccctcactc
tcacagatctttcatgctattcctgagcatgtgggtttcaacattgagctcaaatggatc
tgccagatgaaggatgggtcatgggatggcaacctgtcgtcctacttcaacatgaatacc
ttcctcgacactgtcctgtcttgtgttctgcagaaaggtggcaaaagacgcatcgtcttt
tcttgctttgacccggatatttgcaccatggtgcggcataagcagaacaagtaccccatc
ctcttccttactcagggaatctcagacaggtatcctgaactgatggacatccgctgccag
accacccagatagccataagtttcgcccagagcgagaatattctgggaatcagtgcccat
actgaggagctgctgaagaatcttaccttcattgcggatgcccagtctaaaggcctggtg
gtgttcagctggggagatgacaacaatgaccatgagaacagacggacgctgagagagcag
ggtattgatgggctgatctatgatagtatctgcgaggaccagggagagcagccaaatatc
ttccaagtagaggagcaacactccctgcaggaggttattacagaggagaccctaaagagc
tccacctgctcctgctactccatcccctgctccatggctccctgcattgcctccaaggca
cgtgctggcagcgctgagtccgattctggcctcagctcctcataa
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