Lates calcarifer (barramundi perch): 108896921
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Entry
108896921 CDS
T04895
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108896921 (yy1b)
03083 Polycomb repressive complex
108896921 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108896921 (yy1b)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896921 (yy1b)
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108896921 (yy1b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108896921 (yy1b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108896921 (yy1b)
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
108896921 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
C2H2_ASCIZ
Raffinose_syn
IBR
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
108896921
NCBI-ProteinID:
XP_018551749
UniProt:
A0AAJ7QBM8
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Position
LG7_1:complement(15657419..15663864)
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AA seq
478 aa
AA seq
DB search
MIGIQNAVKMSAFRTSITNSHVYKVWDPPQGTPSTIRNTVIAGFTKVSRCFCMSDHSGDE
NWRGPGRRVVIEEGEQTEAGAEQGVCESVCEVQKGAQHGVNERGKLAEFNMASGDTLYIE
TDGSEMPAEIVELHEIEVETIPVETIETTVVGGDDDDDDGQPMIALQPLVTDDPSSIHHH
QEVILVQTREEVVGGDDSDLHTDGGGGFEDQILIPVPAPGVEDEYIEQTLVTVAGKSSVG
RVKRGGGTGGKKAGKKSYLSGAEAGGRKWEQKQVQIKTLEGEFSVTMWASDDNKDIDHES
VVEEQIVGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKVKEDDAPRTI
ACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT
FEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgataggaatccaaaatgccgttaagatgagtgcttttaggacaagtataactaattct
catgtctacaaagtttgggatcccccccagggaaccccaagtaccatcaggaacactgtg
atagctgggttcaccaaagtctcgcgatgtttctgtatgagcgaccatagtggcgacgag
aactggcgtgggccggggagaagagttgttatcgaagagggagaacagacggaggcagga
gcagagcagggggtgtgtgagtctgtttgtgaggtccaaaaaggagcacaacacggcgtg
aatgagagaggcaagctggcggaattcaacatggcatccggagatacgctgtacattgag
acagacggctcggagatgccggccgagatcgtggagctccacgagatagaggtggaaacg
ataccggtggagactatcgagactacggtggtcggcggggatgacgacgacgacgacggg
cagcccatgattgcgctccagccgttggtcacggacgaccccagctcgatccaccaccac
caggaggttatcctggtccagacccgggaggaggtggtcggcggggatgactcggacctg
catacggacggcggcggcgggttcgaggaccagatcctcatcccggtaccggcaccgggg
gtggaggacgagtatatcgagcagactttggtgactgtggctgggaaaagctcagtgggt
cgggtgaaacggggaggcggcactggtgggaagaaagcgggcaaaaagagctacttaagc
ggcgcggaggctggtggaagaaaatgggaacagaagcaggtgcaaataaagacactggag
ggggaattttctgtcacgatgtgggcatcggatgacaataaagacattgaccatgagtca
gtggtggaggagcagatcgtcggggagaactcccctccggattactccgagtacatgaca
gggaagaagttgccccctggtggcatcccgggaatcgacctatcagaccccaaacagctg
gctgaatttgccagaatgaagcccaggaaagtcaaagaggacgatgctccccggacgata
gcttgccctcataaaggctgcacaaagatgttcagggataactcagccatgaggaagcat
ctccacacccacggtccccgcgtgcacgtctgcgccgagtgcggcaaggcctttgtcgag
agctccaaactcaaacgtcaccaacttgttcacacaggggagaaacccttccagtgtacc
tttgaaggctgcgggaaaaggttttctctggacttcaacctgcgcacgcacgtgcggatc
cacactggagaccgaccctacgtctgccctttcgacggctgcaataagaagttcgcccag
tcaaccaacctaaagtctcacattctcacacacgccaaagccaaaaataaccaatga
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