Lates calcarifer (barramundi perch): 108896922
Help
Entry
108896922 CDS
T04895
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00562
Inositol phosphate metabolism
lcf01100
Metabolic pathways
lcf04020
Calcium signaling pathway
lcf04070
Phosphatidylinositol signaling system
lcf04081
Hormone signaling
lcf04082
Neuroactive ligand signaling
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04270
Vascular smooth muscle contraction
lcf04310
Wnt signaling pathway
lcf04371
Apelin signaling pathway
lcf04540
Gap junction
lcf04621
NOD-like receptor signaling pathway
lcf04912
GnRH signaling pathway
lcf04916
Melanogenesis
Module
lcf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108896922
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108896922
04371 Apelin signaling pathway
108896922
04020 Calcium signaling pathway
108896922
04070 Phosphatidylinositol signaling system
108896922
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108896922
04081 Hormone signaling
108896922
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
108896922
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108896922
09152 Endocrine system
04912 GnRH signaling pathway
108896922
04916 Melanogenesis
108896922
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108896922
04270 Vascular smooth muscle contraction
108896922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896922
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
108896922
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108896922
Endocytosis
Macropinocytosis
Phospholipase C
108896922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
108896922
NCBI-ProteinID:
XP_018551751
UniProt:
A0A4W6DWM2
LinkDB
All DBs
Position
LG7_1:complement(15947516..16048312)
Genome browser
AA seq
1244 aa
AA seq
DB search
MAGAQPGVHALQLKPVSVPESLRKGNKFMKWDDDSTTVTPVTLTVDPKGYFLYWTDQNKD
TDLLDIAYIKDARNGKSTKTPKEAKLRELLDVSTLAGKMENRMLTVVSGPDMVNITYLNF
MAFQEETAKEWAEELFNLASNLLVQNMSREACLEKAYTRLKLQLNPEGRIPVKNIFRMFS
ADRKRVETALENCNLPSGRNDSIPQEDFTPEVYSMFLSNICSRPELDHIFSDVGAKSRPY
LTVEQMTEFINNKQRDPRLNEILYPPLKPEQVQLLVDKYEPNSSLAQKGQISTEGFARYL
NGEENSIIPPEKLDQSEDMTLPLSHYFINSSHNTYLTAGQLAGNSSVEMYKQVLLSGCRC
IELDCWKGRTTEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPIILSFENHVDSPK
QQAKMAEYCRSIFGDALLTEPLEKYPLESGVPLPSPMELMGKILVKNKKKHHKTDGSTKK
KLSEQVSNTYSDSSSVCEPSSPSAGSTKEEMADSSQPSEGAELNLRPQGRKSIGEVEAES
EDEDDDDDDCKKGSMDEGTAGSEAFATEEMSNLVIYIQPVKFNSFEASKKINRSYQMSSF
VETKALEQLTKSPVEFVEYNKLQLSRIYPKGTRVDSSNYNPQLFWNAGCQLVALNFQTID
FSMQLNLGMYEYNGKCGYRLKPEFMRRPDKHFDPFTESTVDGIVANTLSVKIISGQFLSD
KKVGTYVEIEMYGLPVDTKRKVFKTKTSQGNAINPVWEEEAIVFKKVVLPTLASLRIAVF
EEGGKFIGHRIIPVSAIRPGYRYIGLRNEKNQSLTLPALFVYVEVKDYVPDTFADVIEAL
SNPIRYVNLMEQRANQLAALTLEEGGEEEGDKEVEAGSDAPSESKVDQRVALPAENGLSH
TPIIAPKPPSLVGQTQSAGSLKPSVKTEDIIHSVLTELEAQTLEELKQQKGFVREQRKQY
KEMKELVRKHHRKTSELIKEHTARVSELQSQHQRRRSALQKSHKRDGKKSRSEQSLSTLD
QELCELDQECNQRLAELKEQQQQQLLTLRQEQYYSEKYQKREHIKQLVEKLTTIAEECQS
AQLKKLRDICEKEKKDLKKKMDKKRQEKINEAKSKDKNVTEEEKLEINRSFVNEVVQYIK
RLEDAQSKRQERLLEKHKDIRQQIVDERPKLQSDLDQEYQDKFRRLPVEIQEFVQDSSKA
KLSDDGVHGNLVSSSTTEKLNHKASQSEDDMEEGSSERVYDTAL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcacagcctggagttcatgcgctgcagctcaagccagtgtccgtgcccgag
agcctaagaaagggcaacaaatttatgaaatgggatgatgattctaccactgtgaccccg
gtgactctaacagtcgaccccaaaggttacttcctgtattggactgaccagaacaaggat
acggacctactggatatagcgtacatcaaagatgccagaaatggaaagagcaccaaaaca
ccaaaggaagccaagctgcgtgagctactggatgtcagcaccctggcgggtaagatggag
aacaggatgctgacagtggtgagtggccctgacatggtcaacatcacctacctgaacttc
atggctttccaagaggagacagctaaggaatgggcagaagagctattcaacctggcatct
aacctcttggtacagaacatgtccagagaggcctgccttgagaaagcatacactcgactg
aagctgcagctcaaccctgaggggcgaatccccgtcaagaatatcttcaggatgttctca
gcagacaggaagcgagtggagacagccctggaaaactgtaacctcccctctggcagaaat
gactccatcccccaagaagacttcactccagaggtgtacagcatgtttctgagcaacatc
tgctcccgacctgagctggaccacatcttctctgatgtgggggctaagagtcgtccatac
ctcacagtggagcaaatgacagagtttattaacaataaacagcgagaccctcgtctgaat
gagatcctctaccctcctctcaaacctgaacaggtccagctgctggtggacaaatatgaa
cctaattcttcgctggcacagaaaggtcaaatctcgacagaaggctttgccaggtatctg
aatggagaggagaacagcatcatcccccctgagaagctggaccagagcgaagacatgacc
cttcccctctcccactatttcatcaactcctcacacaacacatacctcacagccggtcag
cttgcagggaactcttcagttgagatgtacaagcaggttctgctgtcagggtgccgctgc
attgaactggactgctggaagggtcgcaccacagaagaagagcccgtcatcactcacggc
ttcaccatgacaactgaaatctccttcaaggaggtgattgaggctatcgcggagtgtgcc
ttcaagacctcgcccttccccatcatcctgtcttttgagaaccatgtggactcaccaaag
cagcaggctaagatggcagagtactgccggtcaatatttggagacgcattactgacagaa
cctctggagaaatatcctctggagtctggtgtgccactacccagcccaatggagctgatg
gggaaaatcttggtgaagaacaagaagaaacaccacaagacagacggaagcaccaagaag
aaactgtcggagcaggtttctaacacctacagcgattcttccagtgtgtgcgagccctcc
tcccctagcgcaggttcaaccaaagaggagatggcagattcctcacagccctctgagggt
gctgagctcaacctgaggccgcagggcagaaagtctattggtgaggtggaggcagagagt
gaagatgaagatgatgatgatgatgactgtaaaaagggctcaatggatgagggtacagca
ggcagtgaggcatttgccacagaggaaatgtccaacctggtcatctacatccagccagtc
aagtttaacagctttgaggcttctaaaaagatcaatcgcagctaccagatgtcatccttc
gtggagaccaaagctttggagcaactaaccaaatctcctgtagagtttgtggaatacaac
aagctgcagctgagcaggatctaccctaaaggcactcgagtggattcatccaactacaac
cctcaactcttctggaacgctggctgtcagctggtggctcttaatttccaaaccattgat
ttctccatgcagctgaacctgggcatgtatgagtacaatgggaaatgtggctacagactc
aaaccggagtttatgagacggccggacaagcactttgacccttttactgagagcacagtg
gatgggatagtagccaacacattgtctgtcaagatcatctcaggccagttcctgtcagat
aagaaagtgggcacgtacgtggagatcgaaatgtacggcttaccagtggacaccaagagg
aaagttttcaagaccaagacatctcagggcaacgccatcaaccctgtatgggaagaagag
gccattgtcttcaagaaggttgtcctgcctacacttgcttcattaagaatagctgtgttt
gaagaaggtgggaagttcatcggccaccgcatcattcctgtatcagccatccgtccaggc
tatcgctacatcggcctaaggaatgagaagaaccagtccctgacgctgcctgctctgttt
gtgtatgtagaagtaaaggactatgtcccagacacatttgcagatgtcattgaagccttg
tccaatcccatccgctatgtcaacctgatggagcagagagccaatcagctggctgctctc
actttggaggaaggaggagaggaggagggtgacaaagaggtggaggcaggaagtgatgcc
ccctcagaatctaaagtggaccagagggtagcgttgcctgcagagaatgggctgagccac
acacccattatcgcccccaaacccccatcactggtcggccagactcagtctgcaggttca
ctgaagccatcagtgaagacagaagacatcattcacagtgttctcactgaactggaggct
cagacactggaggagttgaagcaacagaagggctttgttcgggagcagaggaagcagtac
aaggagatgaaggagctggttcggaaacaccaccgcaagaccagtgaactgatcaaggag
cacacagctcgtgtgtctgagctacagagccagcatcagcgccggcgctctgccctgcag
aagagccacaaacgagacggtaagaaaagtcggtccgaacaatctctgtcgaccttggac
caggagctgtgcgagctggatcaggagtgcaaccagaggcttgcagagctgaaggaacag
cagcagcaacagctcctcacacttcgccaggagcagtactacagcgaaaagtaccagaaa
cgagaacacatcaaacagctggtggagaaactgaccactatagcagaggagtgtcagagt
gctcagcttaagaagctcagagacatctgtgagaaagaaaagaaggatcttaagaagaaa
atggacaagaaaaggcaagagaaaatcaacgaagccaaatctaaagacaagaatgtgaca
gaggaagagaagctggagatcaacagatcgtttgttaatgaggtcgtgcagtacatcaaa
cggttggaggatgcacagagtaaaagacaggagagattattagagaagcacaaggacatc
cgccagcagattgtggatgaaaggccaaagctacagagcgatctggaccaggagtaccag
gacaaatttcgccggctgcccgtggagatccaggaatttgttcaggacagcagtaaggcc
aagcttagcgacgatggtgtccatggaaaccttgttagctcatcaacaacagagaagctc
aatcacaaggcgtcgcagtcagaggacgatatggaggagggctcctcggaacgagtatac
gacacggccctttag
DBGET
integrated database retrieval system
