Lates calcarifer (barramundi perch): 108896977
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Entry
108896977 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor DBS
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108896977
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108896977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
Spectrin
PH_10
CRAL_TRIO
DUF7799
LRR_13
Motif
Other DBs
NCBI-GeneID:
108896977
NCBI-ProteinID:
XP_018551871
UniProt:
A0AAJ7QBR9
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All DBs
Position
LG17:1366800..1441301
Genome browser
AA seq
1191 aa
AA seq
DB search
MLCWLREDEMSVQELLQRVQCVITHVDEIMQQEIRPLLAVDIIEQLHRQFALLSGGRGND
GAPIITFPEYSGFSEVPEEDFLNVVTYLTSIPSLDAASIGFIIIIDRRKDKWSSVKASLS
RIAGAFPGNLQLVLVLRPSRFFQRAIADIGIKLHKDDFKMKIVMLNSLSDLHGYVDKGQL
TRELGGSLEYCHSQWIHHRTAIENFAMTVKTTAQMLQKFGTDLAEMELPNDIQCTKDLLT
AHTNKHNNLKDELKLALKQGTTLLGCIKEQAAKSENHKLNPDEMENQTTVERLLAQLDET
ENAFEQFWCKHHLKLEQCLQLRHFEQDFREVKVSLDSLWESLTSLSVIGDCLARVEQLLK
DLKTLEEKAQPTLEKAQLHALHGDQLIQSNHYAVDSIRPKCVELRRVCDDFSNEAKKKTD
VLSKSLQIHTGIEKVNQWCESGIYLLASQAVDKCQTQEGAESALTDIEHFLESAEKSQLT
ELRNLHNQYEVVLSEDIKISVLKALKRLEDVQEMFEKRHVSLKRLSAKQTRPVQPVAPRP
ESSPKRPSLKNPTRTTGSQQPLARRASDNSNSGKQPAEADPNKRKNIRKAKGGIKIEVMH
EESQGGSTHVVVTSETEESLSNRRRHIMTELIETERLYVEELQSIMEGYFEELDNPELSH
LTPPSLENKRDVLFGNLPEIYDFHNKTFLRELEDCIEKPELVGTCFLKRKEELQVYEKYC
QNKPRSEVLWRQCGDSVFFQECQKKLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCSKSE
GTAELEEALATMLDIIKSVNDSMHQIAITGFEGNLSELGKLLMQGSFNVWTDHKKGHSKV
KDLARFKPMQRHLFLYDKMLLFCKKREETTDGHEKTPSYSFKHSLKMSAVGITENVKGDN
KKFEVWYNSREVVYIIQAPSMDVKNMWVSEIRKVLTGQLEACREASQLNIYGAPMRNVQQ
RKLALKQSDSSSPESGFRRANPSPNMRQKRVDASASQSGQSVANTRKRFTLQGLSNRRSL
PAEPAAKEAEVPRRFSLTSSLASSSSSSFATRRTKGPLSASIKSKRHEIKSDPTPFGYED
TLRGAMAAAGKRQSMTSSTATAVGGTSAVPRSTSQPGWTQRRLPSMDTEDFETIPSSAEE
SSNSSEEEGNNKNGDSSRFRVQLTYESHEARNASLETGDLVQFLEETENRH
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggctgagagaggacgagatgtcggtccaggagctcctacagagggtgcag
tgtgtcatcacacatgtcgatgagatcatgcagcaggagatcaggcctctactggctgta
gacatcatagagcagcttcatcgccagtttgccttgctctcaggagggcgggggaatgat
ggtgctcccatcatcacgttcccagagtactcaggcttcagtgaagtgccagaggaagac
ttcctcaatgtcgttacttacctgaccagcatccccagtctggatgctgccagcatcggt
ttcattatcatcatcgatcggcggaaggacaaatggagctcagtaaaggcctcactatca
aggattgctggggcttttccaggaaacctgcagctggtgttggtgctgaggccgtccagg
ttcttccaaagggctatagcagacattgggatcaagctgcacaaggatgactttaaaatg
aagattgtgatgctgaactctctgtcggatctacatggctatgtggataaaggccaactg
acccgggagctaggaggaagcctggagtactgtcacagtcagtggatacaccaccgaact
gccatagagaactttgccatgacagtgaaaaccacagcccagatgttacagaagtttggg
acagacctggcagagatggagcttcctaatgacatccagtgcaccaaagacctgctcaca
gcccacaccaacaaacacaacaacctcaaggatgaactgaagctggctttgaagcagggc
accaccttgttaggttgtatcaaggagcaggcagctaagtcagagaatcacaaactcaac
ccagatgagatggagaaccaaaccactgtggaaaggctcctagcccagttggatgagaca
gagaatgcctttgaacagttctggtgtaaacatcatctgaaactggagcagtgcctacag
ctacgccactttgaacaggacttcagagaggtcaaagtgtctctagattctttgtgggaa
agtctgaccagcttatcggttattggggattgtctggccagagttgaacaactgctaaag
gatctgaaaacgttggaagagaaggctcagcccacacttgaaaaggcccagctccatgca
ctgcacggtgaccagctgatccagagcaaccactatgctgtggactctatacgacccaaa
tgtgtagagctccggcgggtctgcgatgacttcagcaatgaggccaagaaaaagacggat
gttctgtccaaatccctgcagatacacacaggcattgaaaaggtaaaccagtggtgtgag
tctggcatctacctactggcctcccaggctgtggataagtgtcagacacaggaaggggca
gagtcagcactgactgacatcgaacactttctggagtcagcagaaaagagccaactgact
gaactgaggaacctccacaaccagtatgaagttgtcctgtctgaggatatcaagatcagt
gtcctgaaggcactgaagcgactggaggatgttcaggagatgtttgagaagcggcatgtc
agtctgaagagactgtcagctaaacagacgaggcctgtccagcccgttgccccacggcct
gagtcctctccaaaaaggccctcactgaagaacccgaccaggactacagggagccaacag
cctctggctcgcagagcctctgataactctaacagtggcaagcagccagctgaggctgat
cccaacaagaggaagaacatacgcaaggccaagggaggcatcaagattgaggtgatgcat
gaggaaagccaaggaggttccacccatgtcgtagtcaccagtgagacagaggagagtttg
tccaacagacgcagacacatcatgactgagctgattgaaacagagaggctatatgtggag
gaactgcaaagcatcatggagggttattttgaagagctagataacccagagctcagccac
ctcacacctccctcactggagaacaaacgggatgtgctgtttggcaacctgccagagata
tatgattttcacaacaagacatttctgagggagctggaggactgtatagaaaaaccagaa
ctggtgggaacctgctttctgaaaaggaaagaagagcttcaggtgtatgagaaatactgt
cagaataaaccccgctctgaagtcctctggagacagtgtggagacagtgtgttcttccag
gaatgccagaagaaactggaccacaagctctctctggatgcctacctgctaaagcctgtc
cagaggattaccaaataccaactcatgctcaaggagatgttaaaatgcagtaagagtgag
gggacggctgagttggaggaagctttagctaccatgctggatatcatcaagtctgtcaat
gactccatgcaccagatagccatcactggctttgagggaaacctgagtgaactgggcaag
ctgctgatgcagggatcctttaatgtgtggactgaccacaagaaaggccacagcaaggtg
aaggacctggccaggtttaagcccatgcagaggcacctcttcctgtatgacaagatgctg
ctgttttgtaagaagcgagaggagaccacagatggacatgagaagaccccatcctacagc
ttcaaacattcactcaagatgagtgctgtgggcatcacagagaacgtcaaaggagacaac
aagaagtttgaggtgtggtacaacagcagagaggtggtttacatcatccaggctccttcc
atggatgtgaaaaatatgtgggtgtcagagattcgtaaagttcttacaggccagctcgag
gcatgcagagaagccagtcagctcaacatctatggagcccccatgaggaatgttcaacaa
cggaagctggcgctgaaacagtctgattcatcaagtccagagtccggcttcaggagggcc
aaccccagccctaatatgagacagaaaagagttgatgcttctgccagccaatcaggccaa
tcggttgctaacactaggaaacgcttcacgttgcagggactttccaacaggaggtctctt
ccagcagagcctgcggctaaggaggccgaggtcccccgccgcttctctctcacctcctct
ctcgcctcttcttcttcctcctccttcgcaacacgacgcacaaaaggtcccctctctgct
agcataaagagcaagagacatgaaataaagagtgatcccactccttttggttatgaagat
actttgcgtggtgctatggctgcagctgggaaacgtcagagcatgactagcagcactgct
actgctgttggtggcacctcagctgttcccagatccacctcccaaccaggctggacacag
cgacgtctcccttccatggacacagaggactttgagacaatcccttccagtgcagaggaa
tcctccaactcttcagaagaagaaggcaacaataaaaatggtgacagcagtcgtttccgg
gtgcagctgacttatgagtcccatgaagcacggaacgcgtctctggagacaggtgacctg
gtccagtttctggaagaaacagagaacagacactga
DBGET
integrated database retrieval system
