KEGG   Lates calcarifer (barramundi perch): 108897052
Entry
108897052         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108897052
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108897052
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 108897052
NCBI-ProteinID: XP_050931397
UniProt: A0AAJ8BE73
LinkDB
Position
LG14:complement(8629266..8650297)
AA seq 1462 aa
MSYDNSKSTPSSSTRGRVARADEKNNDQEAESEGLNSPKTSGGQPSANVAPQEQGSGAGG
GSSPSGGSGSGVSSGDQRGPNLDDMDGLSSGNDSGERESEGGMERENGSRGRQSTHSSHS
SNGKDSGMMLETTESNKSSNSQSLSPPSGSLAYSLLSTSSEHDPPSTSGCSSDQSARVQT
QKELMKAIKELKLRLPAERKAKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECHGCS
LDLSTFTIEELDNITSEYTLKNTDTFSMAVSFLSGKVVYVSPQGSSLLRCKPECLQGTMF
SELLAPQDVSTFYSGTAPCRLPPWASCIGSASPPVDCTQEKSMFCRISADRTQGGEMRYY
PFRLTPYQLTLRDSDAAEPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVD
ERAVPLLGYLPQDLVGTPILLYIHPEDRPMMVAIHEKIFQFAGQPFEYSPLRMCARSGEY
LTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTVPQGCESRVTTPDIVQLSEQIH
RLLVQPVHSGGSQGYSSLGSSGSRGSRRSHQQHLSASATSSSDSNGPAVDEAAAAVALHK
PMTFQQICKDVHMVKTNGQQVFIESRNRPPPRKNTSAGTTNIRAISSDPIRGLIADMTKP
PKALVPAPLIQKDPPTGYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSSCTASSTSDDD
KQQEASGNNKGGSVSLVGEPPPLPPLTMAAKAESVASVTSQCSFSSTIVHVGDKKPPESD
IIMEEAPATPTLAPPPSITTPTPPAYGPTPANAAITPPHPPPPPTLPLPPPPPPPPPPFP
QAAQPERDSRRSGSVGGGGGGRLGLTKEVLSAHTQQEEQAFLDRFKDLSKLRVFDQTPSS
TVRCHTPAANPLSRGVRCSRDYPAAGGSTSHRRGRGGKRLKHQESPDQHSSLGLSGSRRD
PRTSTASMPLNMPLGPSTNSSSWPSVGSQASIPSAPFAPGMLPIYPVYPPLTQALPIPDP
SRFPPTQMVPPMMALVLPNYMFPQMGAPISQPGATPGHFYNPNFTYPSTTPAVVPSVVSN
PMPIPGTCAPSRSSTPQSYSQTPADREGAESPLFQSRCSSPLNLLQLEESPSNRLEVATA
LAASQQATPSAQGGPAGGQSSANQGSSDDTSKENENGEANESNHDAMSTSSDLLDLLLQE
DSRSGTGSAASGSGFSGTRSSGSGSGSNGCSSSGTSGTSSSQGSHTSKYFGSIDSSENDH
SRKQPAGGSSSAGGDGGEEQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRDMETVLREDR
EALRSMQKHQPRFTEEQKRELSQVHPWIRTGRLPRAINISGCTGCKSPPSVPAAAPFDVE
IHEMELCSVLKAQEEGAGRGKKNLTEAAMDEAHPEDEDEEVEEKGTKTQDCNQDMTAEEQ
RATSEAAEEKVEAQPPESDMTH
NT seq 4389 nt   +upstreamnt  +downstreamnt
atgagttatgacaactctaaatcaacgcccagcagcagcactcgggggcgagtggcaagg
gccgacgagaaaaacaacgaccaggaagcagagtctgaggggttaaactccccgaaaacc
agcggtggtcagcccagtgccaatgtcgcccctcaggagcaggggagcggagccggagga
ggctcgtcgcccagcggagggtcaggatccggagtttcatccggggaccaaagggggcct
aacttggacgatatggacggcctctccagcgggaacgactctggggagagggagagcgag
ggtgggatggagagggagaacgggtcacgtgggcgccagtccacgcacagctcccacagc
tccaacggcaaggactccggcatgatgctggaaaccacggagagcaacaaaagctccaac
tcccagagcctctcacctcccagcggctccctggcctacagcctgctgtcgaccagctcg
gagcacgaccccccctccacctccggctgtagcagtgaccagtcagcgagggtccagacc
cagaaagagctgatgaaggccatcaaggagctgaagctccgcctgccagctgagcgcaag
gcaaagggtcactccagcactctaaatgcactcaaatacgcacttcagtgtgtcagacaa
gtccgagctaacaaggagtactaccaccagtggagcgtggaggagtgtcacggctgcagc
ctggacttgtccaccttcacaattgaggaacttgacaacatcacctcagaatacaccctc
aaaaacactgacacattctccatggccgtgtcattcttgtcagggaaggtcgtgtacgtg
tcaccccagggctcgtccctgctgcgctgtaagcccgagtgtctccaggggacgatgttc
tctgagctcttggccccgcaggatgtcagtactttctacagcggcacggctccctgccgc
ctgcccccttgggcttcctgcatcggatctgcctctcctccagtcgactgcactcaggag
aagtccatgttctgtcggatcagcgccgaccggacgcagggcggcgagatgcgctactac
ccgttccgcctcacgccgtaccagctcactcttagagactcagatgctgctgaaccacag
ccctgctgcctgctcatcgcagagagggtccactctggatatgaagctcctcgtatccct
ccagacaagaggatcttcaccaccagtcacactcccagctgcctcttccaggaggttgat
gagagggcagtgccgttgttgggctacctgcctcaggacttggtgggaacccccatcctg
ctctacatccaccccgaggacaggccgatgatggtggccattcatgagaagatctttcag
tttgctgggcagccgtttgagtattcacccctgagaatgtgcgctcgcagtggggagtat
ctgaccatcgacacaagctggtcttcctttgtcaacccctggagcaggaaggtagcgttc
atcgtagggcgacacaaagtcagaacgagccctctaaatgaagacgtgttcaccgtgccg
cagggctgcgagagccgggtcaccacccccgacatcgtccagctgagcgagcagatccac
cggctgctggtgcagccggtgcacagtggcggctctcaaggctacagctcgctggggtcc
agcggctcgcggggctcccgccgatcgcaccaacagcacctcagtgcctcagccacctcg
tccagcgacagcaacggccccgccgtggatgaggccgccgctgctgtcgctttacacaaa
cctatgacgttccagcagatctgcaaagacgttcacatggtcaagacaaacggacagcag
gttttcatcgagtcccgtaaccggccaccgcccagaaaaaacaccagcgcaggcacaaca
aacatcagagccatcagcagcgacccaatcagaggtctgatagcagacatgacaaaacca
cccaaagctttggtccccgcgccgctcatacagaaggatcctccaaccggctactcctac
cagcagatcaactgtctggacagcatcataaggtacctggagagctgcaacattcccaac
acagttaaacggaagtgtggctcctcctcctgcaccgcctcctccacgtctgatgacgac
aaacagcaggaggccagtggcaacaataaaggtggttcagttagcctcgtaggtgaacca
cctcctctgcccccgctgaccatggccgcaaaggcagagagtgtagcctcagtcacgtcc
cagtgtagcttcagcagcaccatcgtgcacgtgggagacaagaagcctcctgagtcagac
atcatcatggaggaggctcctgcaactcccacgctggctcctcctccatctattacgaca
ccaactccccccgcttacggcccaacacctgccaatgcagccatcacccctcctcaccct
cctcctcctcctactcttcctcttcctcctcctccaccccctcccccgcctcctttcccc
caagccgcgcagccggagagggacagccggagaagtggaagtgtcggaggaggcggaggt
ggacggctgggtctgacaaaggaggtgctctccgcccacacccagcaggaggagcaggcg
ttcctcgaccgcttcaaggacctcagcaagctgcgcgtgttcgatcagacgccgtcctcg
actgtgcgatgtcacaccccagctgccaaccctctgtcacgaggagtgcgttgttcccgt
gactaccctgctgcaggaggcagcaccagccacagacgtggtcgtggaggaaagagacta
aagcaccaggagtcacctgaccagcacagctctctgggcctgagcgggagccgcagagac
ccgagaaccagcacagcctccatgcccctcaacatgcctctcggaccctcgacaaactcc
tcctcctggccctctgtgggctcccaggccagcatcccgtcagcccctttcgcccccggt
atgcttccgatctacccagtttacccgccgcttacgcaggccttacccatcccagaccca
tcacgcttcccccctacccagatggttcctcctatgatggccctggtcctgccaaactac
atgttcccccagatgggagcgcccatctctcagccaggcgccaccccgggacacttctac
aaccctaacttcacgtaccccagcaccaccccggccgtcgtcccctccgttgtctccaac
cccatgcccatccccggcacctgcgccccatctcgtagcagcaccccgcagtcctacagt
cagacacccgccgaccgcgagggcgcggagtcccccctcttccagtcccgatgctcctcc
cccctcaacttgttgcagctggaggaatctccaagcaaccggttagaggttgccacggcc
ttggcggcgtcacagcaagccacgccttctgcgcagggcggtccagccggaggacagagc
tcagccaatcaggggagctctgatgatacctccaaggagaatgagaatggtgaagcaaat
gagtccaaccacgatgcgatgtccacctccagtgacctgctggacctgttgctgcaggag
gactcccgctcaggcaccgggtcagctgcctctggctccgggttctcggggacgaggtcc
tcaggttcaggctctggctcaaacggctgcagttcctctggcaccagtggcaccagcagc
agtcagggcagccacaccagcaagtactttggcagcatcgactcgtccgagaacgaccac
tcccgcaaacagccagcaggtggcagcagcagtgccgggggagatggtggcgaggagcag
ttcatcaagtgtgtcctccaggaccccatctggctgctgatggccaacacagatgacaag
gtcatgatgacgtatcagctgcccgtcagggacatggagacggtgctgcgagaggaccgc
gaggccttgaggagcatgcagaaacatcagccacgcttcactgaggagcagaagagggag
ctgagccaggttcacccctggattcgcacaggacgcctgccacgagccatcaacatctct
ggctgcacaggctgcaagtctcccccctctgtgcctgcggccgcccccttcgacgtggag
atccacgagatggagctgtgcagcgtgctgaaggctcaggaggagggcgccggcaggggc
aagaaaaatctgacagaagcggccatggatgaagctcacccagaggacgaggacgaggag
gtggaggagaaaggaaccaaaacacaagactgcaaccaagacatgacggcagaggagcag
agagcaacctcagaggccgcggaggagaaggtggaggctcagccgcccgagtctgacatg
actcactga

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