Lates calcarifer (barramundi perch): 108897074
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Entry
108897074 CDS
T04895
Symbol
ntn5
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108897074 (ntn5)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108897074 (ntn5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108897074
NCBI-ProteinID:
XP_050931558
UniProt:
A0AAJ8DU54
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Position
LG14:complement(8571530..8587119)
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AA seq
839 aa
AA seq
DB search
MMFLPFSPLLSTSLLPVFLLLLLFLPPSLVSSSLSYTPLSWTSPHDPCYHLDGRSRHCLS
EFINAAYGVPVNASHSLPGPDNDSNITTLTDLHNPHNLTCWMAQRGTDTGKWVLTVPLGR
RFEITYISLQFCHQGEPSDPISISILKSMDFGRTWKPMQHYSSNCLENFGLPSQTVAQTR
HQETEALCSDPRPLQKQRGGMVLAFSTLDGRPSSPDFDHSPTLQDWVTATDIRVVFHQVS
KVVSSDKKEDPQWRDGGEDDRETGLLRWRSGFKGRTGDEVNKLNAANTLVFFDREMKNSD
IRGRNRGEKVDKHGRKGHNKGSDQDEDGHNVTSKEGGDSFGMDTLTSSKKGGKGRGRGHK
KENSNWLPCPNGGCNWTVEGRSRGNKGRELRKRRNNNLNTRQSARNLQLATPSAFISPVR
PPLALSDLQVGGRCKCNGHASRCRRDDTGRAVCVCEHHTAGPDCDVCEDFYFDRPWHRAT
PTHPNPCVACECNGHSNKCRFSMEVFQQSGRRSGGVCQKCRHHTAGRHCQYCQNGYTRNH
SKPLNHRKACQPCQCHPLGAVGHWCNQTSGQCLCREGVTGLRCNRCAPGYKQGKSPLRPC
IRIQEVAPTPVYQPQYSIAEECVSYCQPSQVKVRMNLETYCLKDYVLKVQVRGMERSGPW
WQFSISVQTVFRTGSTSRVRRGSHSLWVPDRDLGCGCPALHVGRTYLLIGAEEGERGWGP
EESRLVADRSTLALQWREHWSPKLRGFRGQDKRGRCPPKSPNNQHHREHSKPQTGYVPPH
LLIEKDTDGVNTHSANVDKTQSSVKLPHTHPHAESKVKSTAATPSPTTPALVCSTLGPE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcttacccttttcccctctcctctccacctctctcctccctgttttccttcta
ctcctccttttcctccctccatccctcgtctcctcttccctttcttacaccccattgagt
tggacttcgcctcatgacccctgctaccatctagacggccgctcgcgacactgcctgtcg
gagttcatcaacgctgcctatggggtcccggtcaatgctagccactcgctaccagggcct
gataatgatagcaacatcaccaccttgacagaccttcataaccctcacaacctcacctgc
tggatggctcaaagaggtactgacaccgggaaatgggttctcactgtaccactgggccgt
cgctttgagatcacctacataagtttgcagttctgccatcagggggaaccatcagatccc
atctctatctccatcctcaagtcgatggacttcgggcgaacctggaagccaatgcaacac
tactccagcaattgccttgaaaactttgggctgccgtcccagacggtggcccagaccaga
catcaagagacagaagctctctgctcagaccctcgaccactgcaaaagcagaggggtggc
atggtgctggcgttctccaccctggacggacgaccgtcctctcccgattttgaccacagc
cccactctccaagactgggtgacggccacagacatacgtgtggtcttccatcaggtgtcc
aaagtcgtcagctcagataaaaaagaagatccacaatggcgtgatggtggagaggacgac
agagagactggacttctgaggtggagatctggcttcaagggtcgcactggagatgaggtc
aacaagttaaacgcagctaatacactggtattttttgacagggaaatgaaaaactcagac
ataagggggaggaacaggggagagaaagtggacaaacatggaaggaagggtcataataaa
ggctcagatcaagatgaagatggacacaatgtgaccagcaaagaaggtggggatagtttt
ggcatggacactctcacttcctcaaagaagggtgggaaaggtagagggcgcggtcataag
aaggagaacagtaactggctgccttgccctaatggcggctgcaattggacagtggagggg
cggagcaggggcaacaaagggcgggaactgaggaagaggaggaacaataatctcaacacg
agacaaagtgccaggaatcttcagttggctacgccgtccgcttttatctctcctgtccga
cctcccctggccctctcggacctgcaggttggaggcaggtgtaaatgtaatggacacgct
tccaggtgtcgccgtgacgacacaggccgagcagtatgtgtgtgtgagcaccacacagcg
gggccagactgtgatgtgtgtgaggatttctactttgacagaccgtggcatcgagctaca
cccacacacccaaacccctgtgttgcctgcgaatgtaacggccattcaaacaagtgccgc
ttcagcatggaggtgtttcagcagtcgggccgacgcagcggaggtgtgtgtcagaagtgt
cgccatcacaccgccggacgccactgccagtactgccagaacggatacactcgcaaccac
agcaagccactgaaccaccgcaaggcctgccaaccatgtcagtgccatcctttgggagca
gtgggtcattggtgcaaccagacctcaggtcagtgtctgtgtcgagaaggagtgaccggc
ctcaggtgcaaccgctgtgccccgggatacaagcagggcaagtcccctctacggccctgc
atacgaattcaagaggtcgcgccaaccccagtgtaccagcctcaatacagcatagcggag
gagtgtgtttcatactgccagccttctcaggttaaagtcaggatgaacctggagacctat
tgtctcaaggactacgtgctgaaggtgcaggtgagggggatggagcgttcaggtccctgg
tggcagttctccatctcagtccaaaccgtcttccgcacggggtccacctcccgcgtccgc
aggggctcccactccctctgggtccccgaccgcgacctcggctgcggctgccccgccctc
cacgtgggccggacctacctcctgattggcgcagaggaaggagagcggggctggggcccg
gaggagagtcgtctggtggcggaccgctccaccctggccctccagtggcgggaacactgg
agccccaaactcaggggcttccgggggcaggacaagaggggacgctgccctccgaaatcc
cccaacaaccagcaccacagggagcactcaaaaccccagactgggtacgtcccccctcac
ctgctgattgagaaagacactgacggtgtgaacacacactctgcaaatgtggacaagact
cagagctcagtaaagctgccgcacacacaccctcacgcagagagcaaggttaaatccaca
gcggcgaccccatcacccactacacctgctctggtgtgttcaactcttggtcctgaataa
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