Lates calcarifer (barramundi perch): 108897142
Help
Entry
108897142 CDS
T04895
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A
KO
K14849
ribosomal RNA-processing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108897142
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108897142
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108897142
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108897142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Fungal_trans
Motif
Other DBs
NCBI-GeneID:
108897142
NCBI-ProteinID:
XP_018552110
UniProt:
A0A4W6DYC2
LinkDB
All DBs
Position
LG1:complement(671085..685131)
Genome browser
AA seq
750 aa
AA seq
DB search
MASLQEPEIQFAQKLASNEKSIRTKAIKKLRKYINVRSQKATGGFTGDELLKLWKGLFYC
LWMQDKPLLQEELSHQISTLIHSFHDIDGQFLYLESFLQTFKREWTGIDRLRMDKFFQLV
RFMFRQTFEMLKKKNWENSVVARFLELLMTQLLQSSSAAPIGLQFHFLDLYMTELAAVGS
AELTADQNLMFIEPFCRTAAKTKDLTLFRAICNSIFSTIIDQAPFAIEDLMKELKAAEDS
DSGQASEEDDEDQIKEKTSKPLSKKRTGKQINGSRSEAEEDDKEEQQEDEDEDELLHLEE
SDTELPCDDDDIVPVLQFDYVGLADKLFELASRSSTPSQNRQRLYKIIKVLRDLSEGIFP
QDEYPEEVSTDEDDEMFGSRKRMKRGGGHLEKDVEGTPAAKKIKGKKKEGSTLEKQNKDL
GKDESADLSPNNENKKKKKKKKAGQSRSAGSEENREGSKQGQILPQAPSVIKEIEDSPQC
SQAEDLEKEAEAQSSISSVKVTEAAIPQDQSKTLFLSEAKKEQLVTVRKEASHPKPRTTD
NKDQSETFSKKKKKRDTSEPKPEITEEQQTPATTKPEMLPEASAPVSGKKKKKSLKAELQ
TDVTEAQSQFNPEAEITSVSCEASGGETMTAAPKTDAAISAKKKKKGTKAERKPEGSEGE
SQIYGVNLEEDATSICCEDSAEDDTITRLNKPTDGVISAKKKSKKKSLEADVQVEIQGRN
TDTKITPEASQHTMVVPLKKKTKKKGKGET
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcttcaggagccagagatccagttcgcacaaaaattagcatccaacgagaag
tcaatccgaaccaaggccataaagaaacttaggaaatacataaatgtcaggtcacagaaa
gcgacaggcggattcacaggtgatgagctgctcaagctatggaagggtcttttctactgc
ctgtggatgcaggataaaccactgctccaggaggagttgtcacaccagatctccaccctc
atccacagtttccatgacattgacggacagtttttatacctggagagtttcctgcagacc
ttcaaaagagagtggactggtattgacaggttgcgcatggacaagttcttccagctggtt
cgcttcatgttcagacaaacttttgagatgctaaagaagaaaaactgggagaacagtgtg
gttgcaagatttctggagctgctgatgacacaactcctgcagagcagcagtgcggcaccc
attgggctgcagttccactttctggacctttacatgactgaactggcagctgtgggttca
gcagagctcactgctgatcagaatttgatgttcattgagccgttctgcagaacagcagcc
aaaactaaagatctgactcttttcagagccatctgcaacagcatcttcagcactattatt
gaccaggctcccttcgccattgaagatttgatgaaggagctgaaagcagcagaggactca
gactcaggacaggcttctgaagaggacgatgaagaccaaataaaagagaaaacaagcaaa
ccactcagcaagaaaaggacagggaagcagatcaatggcagtagatcagaagccgaggaa
gatgacaaggaggagcagcaggaggatgaggatgaggatgagcttcttcacttagaagag
tcagacacagagctgccatgtgatgatgatgacattgtaccagtccttcagtttgactat
gtgggcctggcagacaagctttttgagttagccagtcggagcagcacacccagccagaac
agacagagactctacaaaatcatcaaagtattgcgtgacctcagtgaaggcatctttcct
caggatgagtatccagaggaggtctccacagatgaggatgatgaaatgttcggcagcagg
aagaggatgaagagaggaggaggtcacttggagaaggatgtggaagggaccccagcagca
aagaaaattaaagggaagaaaaaggagggatccacactcgaaaagcaaaataaggacttg
ggtaaagatgaatctgcagacctaagccctaataatgaaaacaagaagaagaagaagaag
aagaaagcagggcagagtagaagtgcaggtagtgaagaaaatagagagggatccaaacag
ggacagatcttgcctcaggctcccagtgtaattaaggagattgaagacagtccacaatgt
tcacaagcagaagatttagaaaaggaagcagaggcgcaaagctccatctcatctgtaaaa
gtcacagaggcagctattccacaagatcagtcaaaaactctgttcctctctgaggcaaag
aaagagcagttagttacagtcaggaaagaagccagtcatccaaagccccgcaccactgac
aacaaggaccaatctgaaaccttttcaaagaagaagaaaaagagggacacttctgagccc
aaacctgagatcacagaggagcaacagactcctgccacgacaaagccagaaatgctgcca
gaagcaagtgctccagtctcagggaagaaaaaaaagaagagcctgaaagctgagttacag
acagatgtaactgaagctcagtcacaattcaatccagaagcagagatcacatcagtaagt
tgtgaagcatcaggaggagaaaccatgacggcagcaccgaagactgatgctgcaatctct
gccaagaagaaaaagaagggcacgaaggctgagaggaaacctgaggggagtgagggtgaa
tcacagatttatggtgtgaacttagaagaggatgccacatcaatatgctgtgaagattca
gcagaagatgacacaatcaccagactcaataaacctactgatggtgtaatttctgccaag
aagaagagtaagaaaaagagccttgaggctgatgtacaggttgaaatacagggaagaaac
acagatactaagatcacacctgaagcatcacaacataccatggtggttccacttaaaaag
aagacaaagaaaaagggaaaaggagaaacttga
DBGET
integrated database retrieval system
