Lates calcarifer (barramundi perch): 108897198
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Entry
108897198 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00100
Steroid biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
108897198
Enzymes [BR:
lcf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
108897198
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
108897198
NCBI-ProteinID:
XP_018552199
UniProt:
A0AAJ7QBW2
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Position
LG1:24831131..24844873
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AA seq
735 aa
AA seq
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MTEGTHLRRRGGPYRTEPSTDLSRWRLTNVEGRQTWHYVEDQETPDREQTMLEAHSLGMD
TNKFVSDSPAARTAVDAALKGMHFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
AMAWKKEMVRYLRSVQLPDGGLGLHIEDKSTVFGTALSYTSLRILGLEPDDPDMVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPAWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAEEDALVLSLRQELYVQDYATINWPAQRNNVAACDMYTPHSTLLTFAYMV
LNVYEAHHSTTLRGRAVKELYEHIQADDRFTKCISIGPISKTINMLVRWYVDGPASPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDSPRLAECLQHAHNFLT
ITQIPENPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEFCPSISQPVT
SEHLYDAVNVLLSMRNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALRHFQKAYPEHRAEEIRSTLRDGLEYCRKVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHIYKDKDVCVEVQKACQFLLDRQMSDGGWGEDFESCEQRRYIQSSTAQIHNTCWALLGL
MAVRHPDRQAIERGVQLLIDKQLPNGDWPQENIAGVFNKSCAISYTSYRNVFPVWTLGRF
STLYPSSALAGKVKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggaacgcatttgcggaggcgaggggggccgtacaggacagagccatccaca
gacctgagccgctggagactgactaatgttgaggggaggcagacctggcactatgtggaa
gatcaggaaaccccagacagagagcagaccatgctggaagcccattcactaggcatggac
acgaataagtttgtgtctgactctccagctgcccgcacagccgtagatgctgctctgaaa
ggtatgcacttctacagtcacctccaggctgaggacggtcactgggcaggggactatggt
ggacctctcttcctgctcccaggcctcctgatcacatgccacgtggctaagattcctctg
gccatggcctggaagaaggagatggtgagatacctgcgctccgttcagctgccagacgga
gggctgggattacatattgaagacaagtctaccgtttttggcacagcgctgagttacacc
tcattaaggatcttgggattagagccggatgatccagatatggttcgagccaggaacaac
ctgcacagcaaaggtggtgcagtaggaattccctcatggggtaaattctggttggccatt
ttaaatgtctacagttgggagggaatgaacacactcctaccagagatgtggttgttccca
gcttggatgcctgcccacccctctactttgtggtgtcattgtcgccaggtctacctcccc
atgagctactgctatgcagtcagactggcagctgaggaagacgccctggtcctcagcctt
agacaggaactttatgtccaagactatgccaccatcaactggccagctcagaggaacaat
gtggcagcatgtgacatgtacacacctcacagcacactactcaccttcgcctacatggtg
ttaaatgtgtatgaagcccaccacagcaccacactgagaggaagggctgtcaaagagctg
tatgagcacatccaggctgacgaccgcttcactaaatgtatcagcattggaccgatctcc
aagactataaatatgctggttcgctggtatgtagatggtcctgcctctccagtttttcag
gagcatgtgtccaggatccctgactacctctggctgggactagatggcatgaaaatgcag
ggcaccaatggatctcaactatgggatacttgttttgctgtacaggctttccttgaggca
ggagcccaggacagccctaggcttgctgagtgcctccaacacgcccataactttctcacc
atcacacagatacctgagaatcctcctgaataccagaagtactacagacagatgaacaag
ggaggcttccccttcagtacccgtgactgtggttggatcgtggctgactgcacagctgag
ggcctgaagtcagtgatgctgctgcaggagttctgtccttccatcagccagcctgtcacc
tctgagcatctatatgacgctgtcaatgtgctgctgagcatgagaaactcagacggtgga
tttgccacatatgaaactaagagagggggtagactcctggaactactcaacccttctgag
gtgtttggtgacatcatgatagattatacctatgttgaatgtacctcagctgtaatgcag
gctctgaggcacttccagaaggcataccccgaacaccgtgctgaagagataaggtccact
ctgagagatggactggagtactgcaggaaggtgcagaggcctgatggatcctgggaaggg
tcctggggagtgtgcttcacatatggaatatggtttggccttgaagcctttgcttgtatg
ggtcacatctacaaggataaggatgtgtgtgtagaagtgcagaaagcttgtcagttcctg
ttggaccgacagatgtcggacggaggctggggggaggactttgagtcgtgcgagcagcgg
cgctacatccagagcagcactgctcagatccacaacacttgctgggctttgttaggcctc
atggctgtcaggcaccctgacaggcaggccattgagagaggagtacagctgctgattgac
aagcagctgcccaatggagactggccacaggagaatatcgcaggagtgtttaacaagagc
tgtgcgatcagctacacctcctacagaaatgtctttccagtctggacccttggccgcttc
tcaacactttaccctagcagcgcgctagctgggaaggtcaaactatga
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